Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0905 ATGGACCTTCAACTTCAACTAGGCCCCTCTCTTCCTACCTTTGATTCTTCTAATTATGATGATGATGAAGATGATCTCCTCTCTTCTTCGTTCTCTGTCTCTCCCACCAAAAAACGCAGCTTAACTGAAGACGACGACGTTTTGCTTCCCACCACTCTGCCTCTTCTTCCCTTAACACCATCCCATGAAATAGTTGACCTTGACGACGACCTCCATACCACTTCCTCCATTGTCACCACCACCACCAAATGTGATGGTGATGATGGGGGAGAATGTGGAGCAGTAGGGTGGCCTCCATTGATGACACAGAGGAAGAAGCTTCGGTTTGATAATGAAGAAGATGACATGGCTAGTGGGATTCGTCATTATGTGAAAGTGAGGATGGAGGGAGAAGGAATTGGACGAAAGGTTGATCTTAGCTTGCATCATTCTTTTCACAAGCTCAAGCAAACCTTGATCTCCATGTTTGGAAGATGTAATGATCATTCAGAGTGCTATGAGTTAGCTTATCAGGACAGAGAAGGTGACTGGCTTCTTGCAGAGGATCTGCCATGGAAGAACTTCCTCCGGTGTGCTCAACGGCTCAAATTGGTCAAGAGAGCAAGTTGA 609 0.4581 MDLQLQLGPSLPTFDSSNYDDDEDDLLSSSFSVSPTKKRSLTEDDDVLLPTTLPLLPLTPSHEIVDLDDDLHTTSSIVTTTTKCDGDDGGECGAVGWPPLMTQRKKLRFDNEEDDMASGIRHYVKVRMEGEGIGRKVDLSLHHSFHKLKQTLISMFGRCNDHSECYELAYQDREGDWLLAEDLPWKNFLRCAQRLKLVKRAS 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0905 202 Gene3D - 116 202 - -
Mibi13g0905 202 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 6 200 IPR003311 GO:0005634|GO:0006355
Mibi13g0905 202 MobiDBLite consensus disorder prediction 1 22 - -
Mibi13g0905 202 SUPERFAMILY CAD & PB1 domains 116 197 - -
Mibi13g0905 202 ProSiteProfiles PB1 domain profile. 121 202 IPR000270 GO:0005515
Mibi13g0905 202 Pfam AUX/IAA family 165 200 IPR033389 -
Mibi13g0905 202 Pfam AUX/IAA family 89 158 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0905 Mibi-ChrMibi13 11545107 11546599 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0905 87 201 B3 DNA Binding Superfamily AT5G20730 31.092 3.03e-10 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mibi13g0905 AUX_IAA 5.3e-13 CL0072