Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0880 ATGTCTGATCAAGTTCGAGTTGTGTTTTTGGATTATAGAGGTGAAGAGACGACAATATTAATAACTTATGATTCAGACAGTGAATTTGAAGACATGGAAGAAGAAGCAGGAATGGTGAATCCTGCAACTCAAAAGTCAATAGAAAGTTTAGAAGAGGTTAGAATTGAAGAGCCTTCATTGTGTTCTATATGTTTAGAGGAGATTCCATCAAATGGAAGACAAGAACAAGAAGAAGGAAAAGCAGTTCGAATTCCTAAACCTTGTGGTCATGTGTTTCATCTTAATTGCATCCTCGAGTGGTTCAACAAACACAATAATTGTCCTATGTGTCGCTTCAAGATTCCAAGCTAG 351 0.3675 MSDQVRVVFLDYRGEETTILITYDSDSEFEDMEEEAGMVNPATQKSIESLEEVRIEEPSLCSICLEEIPSNGRQEQEEGKAVRIPKPCGHVFHLNCILEWFNKHNNCPMCRFKIPS 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0880 116 ProSiteProfiles Zinc finger RING-type profile. 61 111 IPR001841 -
Mibi13g0880 116 SUPERFAMILY RING/U-box 49 114 - -
Mibi13g0880 116 Pfam RING-H2 zinc finger domain 60 111 IPR024766 GO:0008270
Mibi13g0880 116 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 34 115 - -
Mibi13g0880 116 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 27 116 IPR013083 -
Mibi13g0880 116 SMART ring_2 61 110 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0880 21 114 C3H Transcription Factor Family AT1G68180 36.000 4.56e-14 63.9