Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0876 ATGGTGCATTCAAAGAAGTTCAGAGGTGTCAGACAACGTCATTGGGGCTCCTGGGTCTCCGAAATTCGCCACCCCCTCCTGAAGAGGAGGGTGTGGCTTGGGACGTTCGAGACAGCGGAGGAGGCGGCGAGAGCCTACGATCAAGCAGCCATTTTGATGAGTGGACGGAATGCGAAGACGAATTTCCCAATTTCCCATACGCCGGACGGCGATCCCAAGGCGGCGGGGCCTGGCACGGGCCACAACATCAATGCAACAGGGGCGGCAGTGAGGGATCTGGAGGAGATCCTACATGCAAAGCTAAGGAAATGTGGGAAGTTGCCATCGCCATCGATGACATGCCTACGGCTGGATACTGAGAGCTCGAATATTGGCGTTTGGCAGAAACGCGCTGGCCAACGTACGGATAACTCCAACTGGGTTATGACAGTAGAGCTGGGAAAAAAGGCCGGCAGTGAAAATAGTAGTAGTAATGGTAATAATAAGAGTGAGAATAATACTACTAACAGTTATGAGTCTGATAAAACGACGTCGTCGTTTGAGTCTGCAACATCTGAAGGGCATGAAGTGGTGGGCATGGCATCATCAGGAGAAGGGATGAAAGAAGAAGAAAGAATTGCATTGCAAATGATTGAAGAACTTCTTAACAGAAACTGCCCAAGTCCTCCAGGACCTTCATTTCATGATAGTATGGCTGAAATTGAAGACAGCCATGTTCACCATGGTGAAAGCTTTCTCCTTTGA 744 0.496 MVHSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDQAAILMSGRNAKTNFPISHTPDGDPKAAGPGTGHNINATGAAVRDLEEILHAKLRKCGKLPSPSMTCLRLDTESSNIGVWQKRAGQRTDNSNWVMTVELGKKAGSENSSSNGNNKSENNTTNSYESDKTTSSFESATSEGHEVVGMASSGEGMKEEERIALQMIEELLNRNCPSPPGPSFHDSMAEIEDSHVHHGESFLL 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0876 247 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Mibi13g0876 247 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Mibi13g0876 247 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 4 205 - -
Mibi13g0876 247 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
Mibi13g0876 247 MobiDBLite consensus disorder prediction 149 185 - -
Mibi13g0876 247 Gene3D AP2/ERF domain 5 65 IPR036955 GO:0003700|GO:0006355
Mibi13g0876 247 Pfam AP2 domain 6 54 IPR001471 GO:0003700|GO:0006355
Mibi13g0876 247 CDD AP2 5 65 IPR001471 GO:0003700|GO:0006355
Mibi13g0876 247 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
Mibi13g0876 247 MobiDBLite consensus disorder prediction 149 199 - -
Mibi13g0876 247 FunFam Ethylene-responsive transcription factor 2 5 64 - -
Mibi13g0876 247 SUPERFAMILY DNA-binding domain 6 65 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0876 Mibi-ChrMibi13 11118406 11119390 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0876 1 218 AP2-EREBP Transcription Factor Family AT1G15360 55.251 6.11e-72 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi13g0876 AP2 1.1e-12 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi13g0876 13 11118406 11119390 Mibi05g0721 05 6817486 6818210 ECH
Mibi13g0876 13 11118406 11119390 Mibi13g0876 13 11118406 11119390 ECH