LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi13g0857	ATGGCCACTTCCAAGGCCATAACAACCAGAGACGAATCCGACTATGACAGTAGCTCCTCCTCCCTCACCACCTTGCCTGAATCCAGCCGCAGCTGGATGACCAACCTCAGTTTCAGCAGCCGCCGCCGTAGCTCCTCCGTCTCCGTCTCTTCCACCACCACTGACACCACCGTCACCACCACAACATCCTCTTTGTTTCTCACCCCTCACTCCAAAAAACCCCACAAAGCAAACCAAACAGCATGGGAAGCCATGTCTTGTCTCCGCCGTCACAGTAATGGCCACCTCGGACTCCACCATTTTCGACTCCTCCGACGACTTGGTGGCGGCGACCTTGGTAATGTTTACCTCTGTCAGATTAGGAACCCCCTTGTTGTTGGCTCAAAACAGAGTCTTTATGCCATGAAAGTTGTTGACAGAGAGGCCCTTTTAGTTAGGAACAAGTTGCAGAGAGCTGAAATGGAAAAGGAGATTCTGGGTATGCTTGATCATCCATTTTTGCCCACTTTATATGCTGAGTTTGATGCTTCTCATTATTCTTGCTTGGTCATGGAGTTTTGTCCTGGTGGTGATTTGTATGCTTCTCGCCAGCGTCAGCCAGGGAAACGATTCAGCATTCAATCCGCAAAGTTTTATGCAGCTGAGACACTGTTGGCTTTGGAGTATCTTCACATGATGGGGATAGTGTATAGAGATTTGAAGCCAGAGAATGTGTTGGTGAGAGAGGATGGGCATATCATGCTATCTGATTTTGATCTCTCTCTTAAATGTGATGTTGTTCCAAAGCTCTTGAGAAGTAAATCCAGTTTCAAAAATATTCCAAGGAGTTCATCTTCTTATTCATCATCAACAACATATCCTGCCTGTGCTGCTCCCATGCAATCCTGTTTCTCATCAGCATCATCATTTCGCAGCAAGAGCAAGAGAGAGAGTAGAGTCATAACTGTCATAAGGGAAAATGTTGGGGTGCCAAAAGAGCAGGAAAAAAAAGAAGATGATGAAGAAGAAGATGAAGAGATTGAGGATGATGAGCCAGAGCTAGTGGCGGAGCCTATAAATGCAAAGTCTATGTCATTTGTAGGGACTCATGAGTACTTAGCACCAGAAGTGATATCAGGGCAAGGCCATGGAAGTGCAGTGGATTGGTGGACTTTTGGGGTGTTTTTGTATGAGTTGTTATATGGAAGAACACCTTTCAAAGGAGAGAACAATGGCAAAACACTCATAAACATACTGAAGCAGCCATTGGCTTTTCCCAGAATTGCAGCTAGCAGCAGCAAGGAGTATGAAGAGATGGTGAGAGTTCAGGACCTGATAAGCAAACTATTGGTGAAGAATCCCAAGAAGAGAATTGGGAGCTTCATGGGTTCTGTTGAAATCAAGAGGCATGAATTCTTCAGAGGTGTGAATTGGGCTTTGATTAGATCAATTAGGCCTCCTGAGGTTCCTGCTGATATGAACAAGACTAGAAGTAGCAGATCAGTTTTGTTACCAAAACTAAGCAAGAAAGATAAGGATCAGCCCTATCAGATTACTCATAGTTTTGACTACTTCTAA	1557	0.4489	MATSKAITTRDESDYDSSSSSLTTLPESSRSWMTNLSFSSRRRSSSVSVSSTTTDTTVTTTTSSLFLTPHSKKPHKANQTAWEAMSCLRRHSNGHLGLHHFRLLRRLGGGDLGNVYLCQIRNPLVVGSKQSLYAMKVVDREALLVRNKLQRAEMEKEILGMLDHPFLPTLYAEFDASHYSCLVMEFCPGGDLYASRQRQPGKRFSIQSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSLKCDVVPKLLRSKSSFKNIPRSSSSYSSSTTYPACAAPMQSCFSSASSFRSKSKRESRVITVIRENVGVPKEQEKKEDDEEEDEEIEDDEPELVAEPINAKSMSFVGTHEYLAPEVISGQGHGSAVDWWTFGVFLYELLYGRTPFKGENNGKTLINILKQPLAFPRIAASSSKEYEEMVRVQDLISKLLVKNPKKRIGSFMGSVEIKRHEFFRGVNWALIRSIRPPEVPADMNKTRSSRSVLLPKLSKKDKDQPYQITHSFDYF	518

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi13g0857	518	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	228	240	IPR008271	GO:0004672\|GO:0006468
	Mibi13g0857	518	FunFam	protein kinase PINOID 2	99	186	-	-
	Mibi13g0857	518	ProSiteProfiles	Protein kinase domain profile.	101	466	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mibi13g0857	518	SUPERFAMILY	Protein kinase-like (PK-like)	86	490	IPR011009	-
	Mibi13g0857	518	CDD	STKc_phototropin_like	99	484	-	-
	Mibi13g0857	518	Gene3D	Transferase(Phosphotransferase) domain 1	354	484	-	-
	Mibi13g0857	518	MobiDBLite	consensus disorder prediction	323	346	-	-
	Mibi13g0857	518	Gene3D	Phosphorylase Kinase; domain 1	99	186	-	-
	Mibi13g0857	518	MobiDBLite	consensus disorder prediction	1	26	-	-
	Mibi13g0857	518	MobiDBLite	consensus disorder prediction	330	346	-	-
	Mibi13g0857	518	SMART	serkin_6	101	466	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mibi13g0857	518	PANTHER	FLIPPASE KINASE 1-RELATED	25	488	-	-
	Mibi13g0857	518	FunFam	serine/threonine-protein kinase D6PK-like	354	484	-	-
	Mibi13g0857	518	Gene3D	Transferase(Phosphotransferase) domain 1	187	256	-	-
	Mibi13g0857	518	Pfam	Protein kinase domain	102	257	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mibi13g0857	518	Pfam	Protein kinase domain	356	466	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mibi13g0857	518	FunFam	protein kinase PINOID	187	255	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi13g0857	Mibi-ChrMibi13	10890705	10892359	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi13g0857	1	518	AGC Kinase Gene Family	AT2G26700	55.657	0.0	575

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_RSK-2	Mibi13g0857		Pkinase	1.9e-30	CL0016

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mibi13g0857	13	10890705	10892359	Mibi13g0857	13	10890705	10892359	ECH