Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0847 ATGACCGGCAACATGGTAGTGATTATTATAGCACCAATGAATGATGAGATAGAATTAACAAGAGAAGCCAATCATTTTAGTCTCTCCACTGGTGTTTTGCCTTCACTTGGAGCCAGCAATGCTCCCAGAATTAGACTCAAAACCTGCATTATTAACCCTTATGATCCTCATTACAGGTTGTGGCAGAATTTTCTGATAGTGCTGGTGGGGTACACTGCATGGGTTTCACCATTTGAGTTTGGCTTACTGGAAAAACCAGTAGGATTTCTCTCAATCACAGACAATGTTGTCAATGGTCTCTTCGCTGTTGATATAATTCTCACATTCTTTGTTGCCTACATTGACAAAATCACATTCCTTATGGTTGAAGATAGAAAAGCCATTGCCTCCAAATATCTCAAGACTTGGTTTGTCTTTGATGTCATCTCTATCATCCCTTCTGAACTTGCTCGCAAAGTTCCCATATCAGCATTTAGATCCTATGGACTTTTCAACATGCTTCGCCTTTGGCGTCTTCGAAGAGTTAGTGCCCTGTTTGCCAGATTGGAGAAGGACATACACTATAACTATTTCTGGGTTCGAATTGCTAAGCTTATATGTGTTACCCTCTTTGCAACACACTTAGCTGGATGTTTCTTTTATTATATTGCTGCAAATTATCATGATCCTAAGCAGACTTGGATTGGTCTATCACTGGGAAACTTCCATCAAGAGAGCTTGTATACAAAATATGTGTATTCTATGTATTGGTCTATCTCTACTTTATCAACTGTTGGCTATGGCGATTTGCATCCGGTGAATACGCCAGAGATGGTCTTTGACATCTTTTACATGTTCTTCAACCTGGGATTGACGTCCTATTTGATTGGTAATATGACCAACTTAGTTGTCCATGGCACAAGTCGAACCAGTTTGGGATATAATTTTCAGAGGGATACCATACAAGCTGCCTCAAATTTTGCGGAAAGGAATCATTTGCCTGTTAGACTGAAAGAGCAGATGCTTGAACACATGTGTTTGAGGTTCAGAACAGACTCAGAGGGATTGCAACATACCGAGAGCCTCAATACTCTTCCTAAAGCCATCAGATCAAACATTTCACGTAATCTGTTTTACTCTGTGGTGGAAGATGTCTACCTATTTTCTGGAGTCTCAAAGAACTTGATCTTTCAACTGGTAACAGAGATGAAAGCAGAGTATTTCCCTCCAAAAGAAGATGTTATCTTGCAGAACGAAGAACCAACTGATCTTTATATAATAGTCACTGGTGCTGTGGACATGCTAATTGTCAAAAATGGAGTGGAAGAGGTCGTAGGCGAGGCAAAAACTGGTGATGTTATAGGAGAGATTGGAGTACTTTGCTACAGACTACAACCCTATACTGTTCGAACTAAGCGATTGAGCCAGCTACTGAGGATGAACCGCACTACATTTTTAAATGCTATTCAGGCCAATGTGGGAGATGGGAACATAATCATGAATAATCTCCTCCAGCATTTGAAAGAGCTTAAGGACCCATTTATGGATGGAATTCTAGTGACTACAGAGAACTTGCTTGCTAGTGGCAGGGTGAACCTACCACTTAGTCTCTCCTTTGCTGCATTAAGAGGAGATGACTGGTTGTTGCACCAATTGTTGAATCGGGGCTTGGATCCGAATGAATCTGACAACAAAGGAAGGACTGCTTTGCATATAGCAGCATCCAAAGGAAGCTTGGACCATGTCATACTTCTTTTGGACCATGGGGCATATCCAAACATTAGAGATTATGATGGTAGTGTCCCATTATGGGAGGCTATAGTGGGAAGGCACGAGTCTGTGAGCGAGCTGTTAGTAGAAAATGGCGCTAACTTAGAAAGTGGAGATATGGGTCAATTTGCGTGCATTGCCACTGAACAGAATAATCTTAACTTGCTCAAGGATATAGTGAAACACGGAGGAGATGTATCACTAGCTAGGAATTATGATGGGACCACAGCATTACATATTGCTGTGTGTGACGGCAATGTTGAGTTTGTCAAGTACCTTTTGGATCATGGGGCTGATGCTGACAAGCCAGACAAGAATGGTTGGAAGCCAAGAGCTCTAGCAGATCAACAGGGACATGAGGAAATTAAGGCTATTTTTCAGTCCATTGTAGAGCCTAAGGCTTTGACGGCGGCCAATTCAACTCCTGAAAGGTGTGTTGGAAGAACTGCAAGAACTGGGAAGAACCATGGAAATCACCCTGCAAGAGTAACGATTAGTTGCCCTGAAAAATCTGAAATTGCAGGAAAAGTTGTGCTTCTACCATGCAACTTTAAGGATCTGGTTGAGATTGGAGCTAATAGATTTGGTATCACTGGTGCTAGGATTCTGAGCAGGGATGGAGCTGAAATTGATGATCTAGATGTAATTAGAGATGGTGATCATCTTTTTTTTGTCAGTTCTGGAAAGATATCTAAATCCGGTTCCTCTAAGCATGATGCTTTGTGA 2475 0.4149 MTGNMVVIIIAPMNDEIELTREANHFSLSTGVLPSLGASNAPRIRLKTCIINPYDPHYRLWQNFLIVLVGYTAWVSPFEFGLLEKPVGFLSITDNVVNGLFAVDIILTFFVAYIDKITFLMVEDRKAIASKYLKTWFVFDVISIIPSELARKVPISAFRSYGLFNMLRLWRLRRVSALFARLEKDIHYNYFWVRIAKLICVTLFATHLAGCFFYYIAANYHDPKQTWIGLSLGNFHQESLYTKYVYSMYWSISTLSTVGYGDLHPVNTPEMVFDIFYMFFNLGLTSYLIGNMTNLVVHGTSRTSLGYNFQRDTIQAASNFAERNHLPVRLKEQMLEHMCLRFRTDSEGLQHTESLNTLPKAIRSNISRNLFYSVVEDVYLFSGVSKNLIFQLVTEMKAEYFPPKEDVILQNEEPTDLYIIVTGAVDMLIVKNGVEEVVGEAKTGDVIGEIGVLCYRLQPYTVRTKRLSQLLRMNRTTFLNAIQANVGDGNIIMNNLLQHLKELKDPFMDGILVTTENLLASGRVNLPLSLSFAALRGDDWLLHQLLNRGLDPNESDNKGRTALHIAASKGSLDHVILLLDHGAYPNIRDYDGSVPLWEAIVGRHESVSELLVENGANLESGDMGQFACIATEQNNLNLLKDIVKHGGDVSLARNYDGTTALHIAVCDGNVEFVKYLLDHGADADKPDKNGWKPRALADQQGHEEIKAIFQSIVEPKALTAANSTPERCVGRTARTGKNHGNHPARVTISCPEKSEIAGKVVLLPCNFKDLVEIGANRFGITGARILSRDGAEIDDLDVIRDGDHLFFVSSGKISKSGSSKHDAL 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0847 824 ProSiteProfiles Ankyrin repeat profile. 656 688 IPR002110 GO:0005515
Mibi13g0847 824 CDD CAP_ED 380 485 IPR000595 -
Mibi13g0847 824 Pfam Ankyrin repeats (3 copies) 530 620 IPR002110 GO:0005515
Mibi13g0847 824 Pfam Ankyrin repeats (3 copies) 629 702 IPR002110 GO:0005515
Mibi13g0847 824 ProSiteProfiles Ankyrin repeat profile. 591 623 IPR002110 GO:0005515
Mibi13g0847 824 ProSiteProfiles Ankyrin repeat profile. 558 590 IPR002110 GO:0005515
Mibi13g0847 824 FunFam Potassium channel KAT2 368 504 - -
Mibi13g0847 824 ProSiteProfiles Ankyrin repeat region circular profile. 656 688 - -
Mibi13g0847 824 Pfam Cyclic nucleotide-binding domain 400 484 IPR000595 -
Mibi13g0847 824 SMART ANK_2a 525 554 IPR002110 GO:0005515
Mibi13g0847 824 SMART ANK_2a 622 651 IPR002110 GO:0005515
Mibi13g0847 824 SMART ANK_2a 558 587 IPR002110 GO:0005515
Mibi13g0847 824 SMART ANK_2a 591 620 IPR002110 GO:0005515
Mibi13g0847 824 SMART ANK_2a 656 685 IPR002110 GO:0005515
Mibi13g0847 824 SUPERFAMILY Voltage-gated potassium channels 52 296 - -
Mibi13g0847 824 FunFam Potassium channel KAT3 60 298 - -
Mibi13g0847 824 Pfam Ion transport protein 59 303 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mibi13g0847 824 PANTHER POTASSIUM CHANNEL AKT1 24 809 IPR045319 GO:0005249|GO:0006813
Mibi13g0847 824 ProSiteProfiles KHA domain profile. 745 824 IPR021789 -
Mibi13g0847 824 SUPERFAMILY Ankyrin repeat 492 710 IPR036770 -
Mibi13g0847 824 Gene3D - 527 711 IPR036770 -
Mibi13g0847 824 PRINTS EAG/ELK/ERG potassium channel family signature 94 104 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi13g0847 824 PRINTS EAG/ELK/ERG potassium channel family signature 105 114 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi13g0847 824 PRINTS EAG/ELK/ERG potassium channel family signature 244 261 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi13g0847 824 PRINTS EAG/ELK/ERG potassium channel family signature 270 281 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi13g0847 824 PRINTS EAG/ELK/ERG potassium channel family signature 288 297 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi13g0847 824 PRINTS EAG/ELK/ERG potassium channel family signature 71 78 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi13g0847 824 SUPERFAMILY cAMP-binding domain-like 311 500 IPR018490 -
Mibi13g0847 824 ProSiteProfiles Ankyrin repeat region circular profile. 558 589 - -
Mibi13g0847 824 PRINTS Ankyrin repeat signature 559 574 IPR002110 GO:0005515
Mibi13g0847 824 PRINTS Ankyrin repeat signature 672 686 IPR002110 GO:0005515
Mibi13g0847 824 Gene3D Jelly Rolls 348 507 IPR014710 -
Mibi13g0847 824 Pfam KHA, dimerisation domain of potassium ion channel 745 807 IPR021789 -
Mibi13g0847 824 Gene3D - 62 297 - -
Mibi13g0847 824 ProSiteProfiles cAMP/cGMP binding motif profile. 380 499 IPR000595 -
Mibi13g0847 824 SMART cnmp_10 380 497 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0847 Mibi-ChrMibi13 10774501 10781139 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0847 19 808 Ion Channels AT4G32500 56.975 0.0 945