Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0837 ATGAAGGACCCTGAAGAAGATCGAGTTAAATCCAGAAATCCTATGCAGAAACATACGGATCGTAGAAGAAGAGGAAGGAGAAGAAGCCATTGCAAACCAGAGATATTAAAAGAAAAGGGGGTTGATTTAGAAATGAATCCTTATGATGCTGCTTCTTGCAACAATAGCCTTGAGTTCACTCATAGGCCTGGTTATGGCCAGCTTGGGACTAAGTGTGTAGTCAAAGCTAACCACTTTCTTGCAGATATATCAGCATCTGACTTGAGCCATTACAGTGTTAAGATAACACCTGAAGTTACTTCCCGTAAAATAAGTAAAGCTATTATTGCTGAGTTGGTGAGGCTTCATAGAAATACAGACTTAGGAATGAGGCTTCCTGTTTATGATGGAGGAAGGAATCTTTACACTTCTGGCTTGCTTCCTTTTACACACAAAGAATTCTCCATAACATTGACTGAAGAAGATGAGGGTACAGGCAACACCTGGGAAAGAGAGTTCAGAGTGCAAATCAAATTTGCAACCCGAGTCAGCATGCATCAACTAAGGGAGCTTCTAAGTGGGAAACAAGTGAACACCCCACAAGAAGCACTTAACATCATTGATATTGTATTAAGGGAGCTTGCTGCTCAGAGTTACGTGTCAGTCGGAAGGTTTCTCTATTCTGCTGATATAAAAAAACCACAGCAGCTAAGTGGTGGCTTGGAATCATGGCGTGGATTCTACCAGAGTATAAGGCCTACTCAGATGGGTTTGTCGCTTAACATTGACATGTCATCAATGGCGTTTATTGAACCACTACCTGTCATTGATTTTGTTGCTCAAATTCTGGGTAAAGATGTGCATTCAAAACCATTGTCAGATGCAGATCGTGTCAAGATTAAAAAAGCCTTAAGAGGTGTGAAAGTTGAAGTTACTCATAGAGGAAATGTTAGAAGGAAGTACAGGATTTCAGGACTGACATCACAGCCTACAAGAGAGCTTATATTCCCTCTTGATGAGCAAATGAACATGAAATCAGTAGTTGATTACTTCCGGGAAATGTATGGTTATACAATTAAGTATTCTCATTTACCATGCCTCCAAGTAGGGAACGAAAAGAAGGTGAATTATTTGCCAATGGAGGCTTGCAAGATAGTTGGGGGCCAGAGATATACAAAAGGGCTAAATGAGAAGCAGATAACTTCTCTGCTTAAAGTTTCATGCCAAAGACCCCGTGAACAAGAGCTAGACATTCTTCAGACAGTTGAACAAAATGATTATGAGAATAATACCTATGCAAAAGAGTTTGGTATCAGCATAGACGACAAGCTCGCCTCTGTTGAAGCTCGGGTTCTTCCTGCTCCATGGTTGAAATATCATGATACAGGAAGGGAGAAAGAGCACTTGCCACAAGTTGGTCAGTGGAATATGATGAACAAGAAAGTTATAAATGGAAGCATAGTGAGATACTGGGCATGTATCAATTTCTCGCGTAGTGTTCAAGAAAGCACAGCTCGCGGCTTTTGCCAACAGTTGGTGCAGATGTGTCAAATCTCAGGCATGGAATTCAGTCAGGAGCCAGTAATTCCTACTTACACATCAAGACCAGATCAGGTTAAAAAGGCCTTGAAGTATGTACACTCTGCTGCTTTGGACAAACTTGAAGGAAAAGAGCTTGAGTTGCTCATTGCCATTCTTCCAGACAATAATGGCTCTCTGTACGGTGATCTCAAAAGGATTTGTGAAACAGATTTGGGGTTGATTTCTCAGTGCTGCCTCACAAAACATGTCTTCAAGGTTAATAGGCAATACTTGGCAAATGTGGCACTTAAAATCAATGTCAAGATGGGAGGAAGAAACACAGTGCTTTTGGATGCATTGAGTTGGAGGATTCCTTTGGTTAGTGACATTCCAACGATAATATTTGGAGCTGATGTAACTCATCCAGAATGTGGAGAGGATTCTTCTCCATCCATTGCTGCTGTTGTAGCTTCACAGGACTGGCCTGAAGTAACAAAGTATGCAGGACTTGTGTGTGCTCAGCCTCATCGCGAAGAACTTATTCAAGACCTTTTCAAGTGTTGGAAAGATCCTCAGCGTGGTGTTGTTTATGGTGGCATGATCAGAGAGCTCTTGCTCTCATTCAAGAAGGCAACTGGACAAAAACCATTGAGGATAATATTCTACAGGGATGGGGTAAGTGAAGGACAATTCTACCAGGTTTTGCTGTATGAGCTTGATGCCATCCGCAAGGCGTGTGCATCACTGGAACCTAGTTACCAACCTCCAGTGACTTTTGTTGTGGTTCAAAAGAGGCATCACACCAGACTCTTCTCAAGCAATCATGATGACAGAAATAGCACTGACAGGAGTGGCAACATCTTACCAGGTACCGTGGTGGATTCTAAGATCTGCCATCCCACAGAATTTGACTTTTACTTATGCAGTCATGCAGGAATACAGGGCACAAGCAGACCAGCTCACTATCATGTTCTTTGGGACGAGAACAAATTCACTGCAGATGAGATTCAATCCTTAACCAACAACTTATGCTACACGTATGCAAGATGCACAAGATCTGTTTCCGTAGTGCCACCAGCATACTATGCTCATCTAGCAGCTTACAGAGCTAGATTCTACATGGAACCTGATATGCACGGTGAGAATGCTAAAGCAAGGGTTGGTGGGGGAAGATCAAAGGGTGGTTGTTCAGTTCGGCCATTGCCAGCTCTGAAAGAGAATGTCAAAAATGTAATGTTTTACTGTTGA 2748 0.4218 MKDPEEDRVKSRNPMQKHTDRRRRGRRRSHCKPEILKEKGVDLEMNPYDAASCNNSLEFTHRPGYGQLGTKCVVKANHFLADISASDLSHYSVKITPEVTSRKISKAIIAELVRLHRNTDLGMRLPVYDGGRNLYTSGLLPFTHKEFSITLTEEDEGTGNTWEREFRVQIKFATRVSMHQLRELLSGKQVNTPQEALNIIDIVLRELAAQSYVSVGRFLYSADIKKPQQLSGGLESWRGFYQSIRPTQMGLSLNIDMSSMAFIEPLPVIDFVAQILGKDVHSKPLSDADRVKIKKALRGVKVEVTHRGNVRRKYRISGLTSQPTRELIFPLDEQMNMKSVVDYFREMYGYTIKYSHLPCLQVGNEKKVNYLPMEACKIVGGQRYTKGLNEKQITSLLKVSCQRPREQELDILQTVEQNDYENNTYAKEFGISIDDKLASVEARVLPAPWLKYHDTGREKEHLPQVGQWNMMNKKVINGSIVRYWACINFSRSVQESTARGFCQQLVQMCQISGMEFSQEPVIPTYTSRPDQVKKALKYVHSAALDKLEGKELELLIAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKVNRQYLANVALKINVKMGGRNTVLLDALSWRIPLVSDIPTIIFGADVTHPECGEDSSPSIAAVVASQDWPEVTKYAGLVCAQPHREELIQDLFKCWKDPQRGVVYGGMIRELLLSFKKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPSYQPPVTFVVVQKRHHTRLFSSNHDDRNSTDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADEIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAYRARFYMEPDMHGENAKARVGGGRSKGGCSVRPLPALKENVKNVMFYC 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0837 915 SMART PAZ_2_a_3 270 402 IPR003100 GO:0005515
Mibi13g0837 915 Gene3D - 623 915 IPR036397 GO:0003676
Mibi13g0837 915 Gene3D - 444 617 - -
Mibi13g0837 915 ProSiteProfiles PAZ domain profile. 266 380 IPR003100 GO:0005515
Mibi13g0837 915 Pfam Argonaute linker 1 domain 214 263 IPR014811 -
Mibi13g0837 915 ProSiteProfiles Piwi domain profile. 554 875 IPR003165 GO:0003676
Mibi13g0837 915 Pfam Piwi domain 555 874 IPR003165 GO:0003676
Mibi13g0837 915 Pfam N-terminal domain of argonaute 70 204 IPR032474 -
Mibi13g0837 915 FunFam Protein argonaute-2 259 385 - -
Mibi13g0837 915 SMART DUF1785_2 213 265 IPR014811 -
Mibi13g0837 915 MobiDBLite consensus disorder prediction 1 29 - -
Mibi13g0837 915 FunFam Argonaute 10 444 617 - -
Mibi13g0837 915 Pfam Argonaute linker 2 domain 410 452 IPR032472 -
Mibi13g0837 915 SUPERFAMILY Ribonuclease H-like 543 876 IPR012337 -
Mibi13g0837 915 FunFam protein argonaute 10-like 623 915 - -
Mibi13g0837 915 Pfam PAZ domain 270 396 IPR003100 GO:0005515
Mibi13g0837 915 SMART Piwi_a_2 554 875 IPR003165 GO:0003676
Mibi13g0837 915 Pfam Mid domain of argonaute 463 540 IPR032473 -
Mibi13g0837 915 Gene3D paz domain 260 384 - -
Mibi13g0837 915 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 58 876 - -
Mibi13g0837 915 MobiDBLite consensus disorder prediction 15 29 - -
Mibi13g0837 915 CDD PAZ_argonaute_like 265 379 - -
Mibi13g0837 915 CDD Piwi_ago-like 424 874 IPR045246 -
Mibi13g0837 915 SUPERFAMILY PAZ domain 261 420 IPR036085 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0837 Mibi-ChrMibi13 10708417 10713911 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0837 59 915 Eukaryotic Initiation Factors Gene Family AT5G43810 75.145 0.0 1395
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi13g0837 13 10708417 10713911 Mibi13g0837 13 10708417 10713911 ECH