Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0836 ATGACGATTGACGACGAGAGCTCCATTTACGTGGGAGGTCTTCCCTACGATACCTCCGAAGATACCATCCGTACCACCTTCGATCTCTACGGCGCCATTCTTGATGTCAAGATTGTTAATGATGGCCGGGCTAGGGGCAAGTGCTATTGTTTTGTAACTTTCACAAATCCTCGATCAGCAATCGATGCAATCAATGACATGAATGGAAGGGCCATTGATGGGCGTGTGGTTAAAGTAAATGGGGTGAGGACTCGAGGTGGAAGATCAAATTTTGGTAGAGAATTTATTCATCGTGAGACCGATCGGAATGGAGACTGGGATCATGGTAGAGATCGAGACAGGGATTATGATCATGACAGGGACAGGCACAGGAATCGAAATAGGGATTGGTCTCGAGAGCGTGATAGATCTCGAGAGCATGATAGATCTAGAGACTTTGAGCATGAAGGGGTAAGAAGGTATGAGCATGCACATTATCATGATCAAGAAAGAGAACCTTTGCATGTTAGAGATAGGAGTCAAGAGAGACATCAGGTAGATGATGATCAAGAACACAGCAAAACACTTGGCCAAGCTACAGAAGGAGACTATAACCTAGATTATGATACAGACAGGAAGTTGGAGAGGACTTATGATGATGATAGAAGTTTTGATGGGGACAGAACTCAACACTCAAGGAGAAGCAATGGATTAAATGTTACAAAACAACCTGACATGGATTTTTCTTCAGACTCAGATGGTAACAGCAGTGATGAGATTGCAGATCAATTAGAGAGGTCAACTCAAAGGCTTGATCAACTGAAAAATGAGGTCTCTCAGATGGAAGAGAAGTTACAAGAGAAACGACACCTTGTTGTGGATTTACAAAAGCAATCTAGGAAAATGGAGGATGCATTAGTTAATGCAAAGAAACATTCTTCTTATCGTCAGACACAGTTGACTAAGCTGCACCAATGTTTTCTGCAAGTGAAAGAATACACAGAGCGATCAAAAGCCTGTGAAAAAGAACTTCAGACTCTGGTTGATGCGATAATATTAGAGAGTGATGGTGATGGAGAAGCTTTAGGCTTAAACGACATACAAACAATAAGTGGATATGTATGA 1104 0.4203 MTIDDESSIYVGGLPYDTSEDTIRTTFDLYGAILDVKIVNDGRARGKCYCFVTFTNPRSAIDAINDMNGRAIDGRVVKVNGVRTRGGRSNFGREFIHRETDRNGDWDHGRDRDRDYDHDRDRHRNRNRDWSRERDRSREHDRSRDFEHEGVRRYEHAHYHDQEREPLHVRDRSQERHQVDDDQEHSKTLGQATEGDYNLDYDTDRKLERTYDDDRSFDGDRTQHSRRSNGLNVTKQPDMDFSSDSDGNSSDEIADQLERSTQRLDQLKNEVSQMEEKLQEKRHLVVDLQKQSRKMEDALVNAKKHSSYRQTQLTKLHQCFLQVKEYTERSKACEKELQTLVDAIILESDGDGEALGLNDIQTISGYV 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0836 367 MobiDBLite consensus disorder prediction 198 225 - -
Mibi13g0836 367 SUPERFAMILY RNA-binding domain, RBD 4 112 IPR035979 GO:0003676
Mibi13g0836 367 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 9 78 IPR000504 GO:0003723
Mibi13g0836 367 PANTHER GEO13361P1-RELATED 6 198 - -
Mibi13g0836 367 Coils Coil 250 305 - -
Mibi13g0836 367 Gene3D - 2 97 IPR012677 -
Mibi13g0836 367 SMART rrm1_1 8 80 IPR000504 GO:0003723
Mibi13g0836 367 MobiDBLite consensus disorder prediction 102 189 - -
Mibi13g0836 367 FunFam RNA-binding (RRM/RBD/RNP motifs) family protein 2 99 - -
Mibi13g0836 367 CDD RRM_SF 9 80 - -
Mibi13g0836 367 Coils Coil 323 343 - -
Mibi13g0836 367 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 7 84 IPR000504 GO:0003723
Mibi13g0836 367 MobiDBLite consensus disorder prediction 226 250 - -
Mibi13g0836 367 MobiDBLite consensus disorder prediction 102 251 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0836 7 73 Eukaryotic Initiation Factors Gene Family AT2G23350 35.821 7.23e-09 55.5