Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0835 ATGGCTTCTCCATCTGAACTTAGCCTGGATTGCAAACCCCACAGCTATTCTTTGCTTCTGAAATCATTTGGAGATCAAGCAGATCATACCTACAAGCTTGAGGACTTCCTTTCTCGTCTTGAGGAAGAACGTCTCAAGATTGATGCCTTCAAGCGCGAGCTTCCTCTCTGCATGCAGCTTCTTACCAACGCTATGGAGGCATCAAGGCAACAACTTCAGGCGTACAAAGCAAATCAAGGTACAACGAGGCCAGTGCTAGAAGAATTCATACCCATCAAGCAACCAACCACTGAAAGCTCTGAGAAAGCATCCAACATATCAGACAATAAGGCTAATTGGATGACATCTGCTCAATTATGGAGCCAAGCAAATAATGAAGGAACAACCAAGCCCCAGTCCACAATCACATCATCATCCCCTACTAATAAAGAAGCTGATATTGGTTTCATGAGTAGTGTGAGCCCTAAGCTTGCTCTTGACAACAAACAGAGGATTAATGGTGGAGCCTTCCTTCCATTCTCAAAAGAAAGAAGCTCACCATCATGCCATAGTAATAACTCCACATTAAGGGTCATCCCAGAGTTAGCCCTCGCCTCTGTTGAGAAAGAAATGGAGGATCATCATAAGAAATGCATAGAAGCAGAAAATGCATCAGTCTCATGTCCCAAGAGGGAAAATTCTGGTAAACCCTCATCAGGAATAGTGGTCAGTGATCAAGGAAAAGTAGCTCCATCATCAGTTCCATCTGATCCACAAACAACCAACACCACCAATAACAACACCAACCAAACTCACAGGAAGGCAAGAAGATGTTGGTCACCAGACCTGCACCGCAGATTTGTAAATGCTCTTCAGATGCTAGGCGGATCTCAAGTGGCTACCCCAAAGCAGATAAGGGAACTGATGAAGGTTGACGGTTTGACCAATGATGAAGTTAAAAGCCATCTCCAGAAATATAGGCTTCATACGAGACGTCCGAGTCCAAGCCCACTAGCAACCGGGTCACCCGCTCCTCAACTCGTCGTCCTAGGAGGAATATGGGTCCCACCGGAGTACGCGGCCGCCGCCTACAGCACACACCCAACGTCCCACGCGCCGCCGCCTCCCTACTGTTCGGCGACGGCGGTGCACCAAGAATTCTACGCTCCGGCGCAGTACCAGACGGTGTTACATCAGCACCAACTGCAGATGTATAATAATAATAAGGGGAATTCGTCGGAGGAGATGAGAGGAGAGAGGTCGGAGAGTATAGAGGATGGGAAATCAGAGAGTAGCAGCTGGAAGGGAGAGATGAGTGGGGACAATAATAATAATAATGAAGCCAAGAGGAAGGGATTGCCTGCTCCTCTCACTCAAGATGGAGAACACACTAGTCGCAGCGACACCACTCTCAAATTCTAG 1401 0.4747 MASPSELSLDCKPHSYSLLLKSFGDQADHTYKLEDFLSRLEEERLKIDAFKRELPLCMQLLTNAMEASRQQLQAYKANQGTTRPVLEEFIPIKQPTTESSEKASNISDNKANWMTSAQLWSQANNEGTTKPQSTITSSSPTNKEADIGFMSSVSPKLALDNKQRINGGAFLPFSKERSSPSCHSNNSTLRVIPELALASVEKEMEDHHKKCIEAENASVSCPKRENSGKPSSGIVVSDQGKVAPSSVPSDPQTTNTTNNNTNQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSPSPLATGSPAPQLVVLGGIWVPPEYAAAAYSTHPTSHAPPPPYCSATAVHQEFYAPAQYQTVLHQHQLQMYNNNKGNSSEEMRGERSESIEDGKSESSSWKGEMSGDNNNNNEAKRKGLPAPLTQDGEHTSRSDTTLKF 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0835 466 MobiDBLite consensus disorder prediction 406 425 - -
Mibi13g0835 466 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 20 428 IPR044787 GO:0003700|GO:0006355
Mibi13g0835 466 MobiDBLite consensus disorder prediction 123 143 - -
Mibi13g0835 466 MobiDBLite consensus disorder prediction 220 268 - -
Mibi13g0835 466 Coils Coil 58 78 - -
Mibi13g0835 466 Gene3D - 266 324 - -
Mibi13g0835 466 SUPERFAMILY Homeodomain-like 264 325 IPR009057 -
Mibi13g0835 466 MobiDBLite consensus disorder prediction 400 466 - -
Mibi13g0835 466 MobiDBLite consensus disorder prediction 426 442 - -
Mibi13g0835 466 Coils Coil 197 217 - -
Mibi13g0835 466 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 267 322 IPR006447 GO:0003677
Mibi13g0835 466 Pfam Myb-like DNA-binding domain 269 320 IPR001005 -
Mibi13g0835 466 MobiDBLite consensus disorder prediction 220 267 - -
Mibi13g0835 466 FunFam Myb family transcription factor 266 324 - -
Mibi13g0835 466 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 264 324 IPR017930 -
Mibi13g0835 466 Coils Coil 33 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0835 Mibi-ChrMibi13 10681176 10683640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0835 1 466 G2-like Transcription Factor Family AT2G03500 47.475 1.72e-122 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mibi13g0835 Myb_DNA-binding 1e-05 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g0976 09 18302169 18304950 Mibi13g0835 13 10681176 10683640 CCT
Mibi13g0835 13 10681176 10683640 Mibi13g0835 13 10681176 10683640 ECH