Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0824 ATGGCATATGTGACGTCCCACACGCCTTCCCACCATCCGAACCACACTCTCTGTGTGCGCGTCTCAGAGAATGAACCGGACAGAGACAGAGACATGGATGAAACTTTGAATAACCCCCCAACCAATATGTTTCCTTCGAATAATTCTTTTCCCTTTGACAGCAACCTAAACTCCACGCAACAACAAAGCCTTCTTCTTCCTCCTCCTCCTTTCTCCTTTCTTCACTTCCCTCCTCCTCCCTTTGAAGACAACAATGGAATCTTCTTCCCTCACCACCATGACCACCACCTCTTACTTCATAATCATCATCAATCACAATCTCTTCTAGCTGAAGAAGCAGGCATAATGGATATTTTGAACAAGCCGAATAATGAGCAGATCCCGGCAAAAAACAAGAGGATATGCAAGAGAGATAGGCACAGCAAGATCAAGACATCTAAAGGGCTAAGAGATCGGAGAATGAGACTCTCTCTTGAAGTAGCCAAGAGATTCTTTGGTCTTCAAGACATTCTTGGCTTTGACAAGGCAAGCAAAACAGTTGAGTGGCTGCTGAATCAGTCAAAGGATGAGATCAAACGGCTAGCAATGGACAAGAATTACAATAATAATGATAGTAATTGCAGTGGGGTAGTGAAGAGTGCATCTTCAACTTCAGAGTGTGAAGGGGTTTCAGGTTTGGACGATGTATCATTAAGTGGGATGAATAATAATCAAGACCAACAAGAGGGAGGAGATCATCATCAACCTTCCTTACCGGTGACGATGACGACAACGAAGAGAAGGTCAACAAAAAATACAAGAAAGATTGCTCTAATGTTGGATCCTCTAATTGCAAGAGAGTCAAGAGAAAAGGCTAGAGAGAGGGCAAGAGAGAGGACCAAACAGAAGCAGAAGATGAAGATGAAAAGCAGTCGCAAATTATTGGCAGAAGCTGATGATGAAACAACCAACCATAATTGTAATCTCACACAATTTGGTTCATGGAATCCGTTTGAAACAGGAGAAAAGGTTAAAAATCCCACCTTGGAGGTCAATGTTATGCCCTCGGCTGCTAAAGAAGATGAACCAAATTCTCAGGCAAACGATGATGATTCCTTGGCGGTTAATATGATATTCAACTCATTGAATACTTCATCTACATTCCTACAAGATCACCATCAATTTGCGGAATTTCAGTCCTTGTCGAAATTTTGGGAGGCCTACAACAACAATCACATGATCTAA 1224 0.4224 MAYVTSHTPSHHPNHTLCVRVSENEPDRDRDMDETLNNPPTNMFPSNNSFPFDSNLNSTQQQSLLLPPPPFSFLHFPPPPFEDNNGIFFPHHHDHHLLLHNHHQSQSLLAEEAGIMDILNKPNNEQIPAKNKRICKRDRHSKIKTSKGLRDRRMRLSLEVAKRFFGLQDILGFDKASKTVEWLLNQSKDEIKRLAMDKNYNNNDSNCSGVVKSASSTSECEGVSGLDDVSLSGMNNNQDQQEGGDHHQPSLPVTMTTTKRRSTKNTRKIALMLDPLIARESREKARERARERTKQKQKMKMKSSRKLLAEADDETTNHNCNLTQFGSWNPFETGEKVKNPTLEVNVMPSAAKEDEPNSQANDDDSLAVNMIFNSLNTSSTFLQDHHQFAEFQSLSKFWEAYNNNHMI 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0824 407 MobiDBLite consensus disorder prediction 279 306 - -
Mibi13g0824 407 Pfam TCP family transcription factor 136 300 IPR017887 -
Mibi13g0824 407 ProSiteProfiles R domain profile. 279 296 IPR017888 -
Mibi13g0824 407 MobiDBLite consensus disorder prediction 1 49 - -
Mibi13g0824 407 MobiDBLite consensus disorder prediction 1 17 - -
Mibi13g0824 407 ProSiteProfiles TCP domain profile. 136 194 IPR017887 -
Mibi13g0824 407 MobiDBLite consensus disorder prediction 219 260 - -
Mibi13g0824 407 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 121 406 IPR005333 GO:0003700
Mibi13g0824 407 MobiDBLite consensus disorder prediction 219 264 - -
Mibi13g0824 407 Coils Coil 282 302 - -
Mibi13g0824 407 MobiDBLite consensus disorder prediction 279 294 - -
Mibi13g0824 407 MobiDBLite consensus disorder prediction 21 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0824 Mibi-ChrMibi13 10497590 10499988 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0824 130 318 TCP Transcription Factor Family AT3G18550 40.102 4.87e-30 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mibi13g0824 TCP 1.4e-44 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi13g0824 13 10497590 10499988 Mibi13g0824 13 10497590 10499988 ECH