Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0816 ATGTCATCCAGTAGGCCGCTGACACCTGAATATAAACCTTCATGTCTATCCCTGATAAATCCCCATATCAACGTCCACCTCCCTCCTCCTCCTCTTCTTTCTGATCTTTCTGCTTTTCTGATCTTCGATCGCTTTATAGTTTATTCTTCATCTATTCACGCTTTCGCAAATCTGGATTCTTCGTCCTTCTCCGCTCGACCTGGTGAAAATATGGATTCGATGGACATCGTTGGGAAATCAAAGGAAGACGCTTCCCTTCCTAAAGCAACTATGACAAAGATTATTAAAGAGATGCTACCCCCTGATGTACGTGTTGCTAGAGATGCACAGGATCTATTGATCGAATGCTGTGTAGAGTTTATAAACCTCGTTTCATCAGAGTCCAATGAAGTCTGTAATAGAGAGGATAAACGGACAATTGCACCAGAGCATGTATTGAAGGCTTTACAGGTTCTTGGATTTAGCGAGTACATCGAGGAAGTTTATGCAGCATATGAGCAGCATAGGATTGAGACTATGCAGGACTCTTTAAGAGCTGGCAAGTGGAGCAATGGAGCTGAGATGACTGAGGAGGAAGCATTACTGGAGCAGCAAAGGATGTTTGCAGAGGCGCGTGCTAGAATGAACGGTGGGACCATTGATGCTTCCAAGCAGCCAGATGGTGACCAAACTTTAGATGGCTAA 684 0.443 MSSSRPLTPEYKPSCLSLINPHINVHLPPPPLLSDLSAFLIFDRFIVYSSSIHAFANLDSSSFSARPGENMDSMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNEVCNREDKRTIAPEHVLKALQVLGFSEYIEEVYAAYEQHRIETMQDSLRAGKWSNGAEMTEEEALLEQQRMFAEARARMNGGTIDASKQPDGDQTLDG 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0816 227 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 84 149 IPR003958 -
Mibi13g0816 227 Gene3D Histone, subunit A 73 212 IPR009072 GO:0046982
Mibi13g0816 227 MobiDBLite consensus disorder prediction 208 227 - -
Mibi13g0816 227 FunFam Negative cofactor 2 beta 76 212 - -
Mibi13g0816 227 PANTHER PROTEIN DR1 HOMOLOG 71 225 IPR044255 -
Mibi13g0816 227 SUPERFAMILY Histone-fold 82 212 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0816 Mibi-ChrMibi13 10364610 10370758 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0816 71 223 CCAAT-DR1 Transcription Factor Family AT5G23090 83.766 3.27e-92 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Mibi13g0816 CBFD_NFYB_HMF 8.5e-22 CL0012