Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0804 ATGGCACCACAAGATACCGCTAATTGTGTTGAAATGCCCCATAAATCTTTTGGTCTACTGCGGGATCAGGTTCAGCTAGTAAAAAGAAAGGACTCTGATCGCTATGAAATTGTCTCAATCCCAGATTCTCTTTCATTTGAGAAAGGTTTCTTCATAGTTATTCGTGCATGCCAATTGCTGGCTCAAAAGAATGATGGGATAATATTAGTCGGAGTTGCTGGACCCTCTGGAGCTGGGAAGACAGTTTTCACTGACAAGGTCCTCAACTTCTTGCCAAGCGTTGCTGTCATAACAATGGACAACTATAATGATTCTAGTCGAGTCATAGATGGCAACTTTGATGACCCTCGGCTGACAGATTATGATACATTGCTCGCAAATATAAAGGGTCTCAAAGTTGGCAAGCCAGTTCAGGTTCCAATATATGATTTCAAGTCTAGCTCTCGCATAGGCTACAGGACTGTTGAAGTCCCTAGCTCCCGCATCGTCATTGTAGAAGGCATATATGCCTTGGGTGAAAAATTACGTCCTTTGCTAGATCTTCGAGTGTCTATCACTGGAGGAGTACACTTTGACCTTGTCAAGAGGGTCTTGCGGGACATCCAACGTGCTGGTCAAGATCCTGAAGAAATAATTCATCAAATTTCTGAAACGGTATATCCGATGTATAAAGCCTTTATTGAGCCAGATCTCCAAACAGCACATATAAAAATCACAAACAAGTTCAATCCATTCTCTGGATTCCAGAATCCCACCTACATATTGAAATCAACAAAGGCTGTGACAGAGGATCAAATCAGGGCTGTTATTGCTGCGGAGCATACTGAAACCACAGAGGAAACATATGACATATATCTTCTACCACCTGGGGAAGATCCTGAAGCATGTCAATCATACTTGAGGATGAGAAACCGGGATGGAAAGTACAATCTTATGTTTGAGGAATGGGTTACAGACAGTCCGTTCATAATATCTCCTAGAATTACTTTTGAGGTTAGTGTACGCCTTCTGGGAGGGCTAATGGCCTTGGGGTACACAATTGCTGCTATCCTGAAGAGAAACAGCCATATCTTTCATGATGATAAAGTATCCGTAAAAACTGATTGGTTGGAACAACTTAAACGCGTATATGTTCAGGTGCAAGGGAGAGATAGAAACTATGTTAAACATGTGGCAGAGAAACTGGAGCTGGATGGTTCATATGTTCCTCGCACCTACATTGAACAAATTCAGTTGGATCAGCTTATAAATGATGTGATGGCATTGCCAGATGATTTGAAGACCAAACTCAGCATCGAAGATGATAAGGTTTCGAGCCCCAAAGAAGCCCTTTCCAGAGTTTCTGCAGATAGGAGAACCAAGTATCTAAGAACTATGTCACACTCATTTTCAAATCATAGAGACAAGGGTCTAACTAAGTTGACTAGATTAGCTATAAATAACAGAGGATTTGATCGACATGCTTTGGAATCACCTGCAGCAATTGCAAACCAAGGAGTCATTACACAACTTTCTGATCAAATTTCTACATTGAACGAGAGAATGGATGAGTTCACATCCCGTATTGAAGAGCTGAATTCTAAGTTTGCAAACAGAAAAGTTTCCGCCAGTCAGCAGAACTTGGCTGTACAGTCTGAAGCTTACAATGGTTCGGGACCCACTTCTCTTTTCCTTAATGGGTGTGGTAATGGCTCAATGAATGGATCACTGACACTGTTGCCCAATTCTTCATCATCTTCCCAACTGACAAAAGATTCCCAGCTGTTCGAAGAGGTTGTTCTTATTACACGGGGACAATGTCGAATCATGAATCAACTAGATACTCTGAGCAATCTTTTGCATGAATATTTAGGACAGAGGGTACATCTAGGAAAAGCAAACGAAAAAAGCAGGACGCCCAATGTTAACTTCATCCCGATTGTTTTGACTTTGGCAATTGGTGCTGTTGGCGTCTTTTGGTTCAAGGGTTTTGCACCCCGTAACTAA 1986 0.4174 MAPQDTANCVEMPHKSFGLLRDQVQLVKRKDSDRYEIVSIPDSLSFEKGFFIVIRACQLLAQKNDGIILVGVAGPSGAGKTVFTDKVLNFLPSVAVITMDNYNDSSRVIDGNFDDPRLTDYDTLLANIKGLKVGKPVQVPIYDFKSSSRIGYRTVEVPSSRIVIVEGIYALGEKLRPLLDLRVSITGGVHFDLVKRVLRDIQRAGQDPEEIIHQISETVYPMYKAFIEPDLQTAHIKITNKFNPFSGFQNPTYILKSTKAVTEDQIRAVIAAEHTETTEETYDIYLLPPGEDPEACQSYLRMRNRDGKYNLMFEEWVTDSPFIISPRITFEVSVRLLGGLMALGYTIAAILKRNSHIFHDDKVSVKTDWLEQLKRVYVQVQGRDRNYVKHVAEKLELDGSYVPRTYIEQIQLDQLINDVMALPDDLKTKLSIEDDKVSSPKEALSRVSADRRTKYLRTMSHSFSNHRDKGLTKLTRLAINNRGFDRHALESPAAIANQGVITQLSDQISTLNERMDEFTSRIEELNSKFANRKVSASQQNLAVQSEAYNGSGPTSLFLNGCGNGSMNGSLTLLPNSSSSSQLTKDSQLFEEVVLITRGQCRIMNQLDTLSNLLHEYLGQRVHLGKANEKSRTPNVNFIPIVLTLAIGAVGVFWFKGFAPRN 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0804 661 CDD UMPK_like 69 241 - -
Mibi13g0804 661 Gene3D - 256 414 - -
Mibi13g0804 661 Gene3D - 68 249 IPR027417 -
Mibi13g0804 661 SUPERFAMILY CYTH-like phosphatases 262 409 IPR033469 -
Mibi13g0804 661 PANTHER URIDINE KINASE 14 425 - -
Mibi13g0804 661 PRINTS Uridine kinase signature 134 149 - -
Mibi13g0804 661 PRINTS Uridine kinase signature 67 84 - -
Mibi13g0804 661 PRINTS Uridine kinase signature 226 239 - -
Mibi13g0804 661 PRINTS Uridine kinase signature 190 200 - -
Mibi13g0804 661 ProSiteProfiles CYTH domain profile. 250 412 IPR023577 -
Mibi13g0804 661 Coils Coil 501 528 - -
Mibi13g0804 661 Pfam CYTH domain 273 406 IPR023577 -
Mibi13g0804 661 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 240 IPR027417 -
Mibi13g0804 661 Pfam Phosphoribulokinase / Uridine kinase family 70 238 IPR006083 GO:0005524|GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0804 Mibi-ChrMibi13 10266491 10271222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0804 69 238 PRT Gene Family AT5G40870 29.609 1.59e-18 87.4