Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0802 ATGCTGAAAAGAGACTATCCCAACAATTGGGTACGACTCTGTGATTCTTGCAGAGTTTCTGCTTCCTCACTTTACTGTCATACCGATTCAGCGTACCTCTGTTCTTCCTGCGATGGACAAATTCACGCGCTTGGGTCTCCAGGTTGGGCCCACCACCGTGTAAAACTGTGCGGCGCGTGTGAGAACGCTCCGGTGGCTTTCACATGTAAGGCTGATGATGCTTCACTTTGTGTTGACTGTGACTTTGAAATTCACTCTGCAAACCCAATCGCTAGCCGACACAACAGAGTCCCTGTTTCTCCTCTGTCTCGTATACTCGACGACAAAATGGAAAATCCAGATGAACAGCCTAATTACGAGGTTGTCGGAAACAACAACAACAACATAAGTAGTAAGGAAATGGATGAGAGAGAAGCTGACTCGTGGTTACTTCTGGGTTCTGCTGATACTATTGATAGCCAGGTTGATGATGGGTTTATGTTTGGAGAAACTGAGGATGATCACCATGCGTACGTGGGGTTTGTGGAAGAGTGTGATTCATCCACAAAGTTCAAATCTTTACAGGAAGATCGTGATCAGGAGCAACAAACTTATAGTTTCTCTGAAGAGATGATCGAAAGTGACAGTGTTGTGCCAGTTCAATCGGTTGAAGCTGATCAGCCTAAGCAATTTCAGCAACAGCAGAATATGTACTTCAATATGGAGCAAAAGCCATCATCAAGAGTGGCTTTCACTAATTACGCCTCGAATTGCCGGAGCGTGCCTGTTCCTTACATGGATGCTCAAATGCTGCAAAGAGGGACGATGAGTGACATGGCAGGGTACAGATTTGCCAAAGGAGCAGAGATATTCCCAAGTGCTTCAGTTTCAATGCAAATGCATCACTTTGGGCAGATGAACAGGAAAGCTGGAGTGGAAAAATACAGAGAGAAGAAGAAGTCTAGAAAGTTCGAGAAGAGAATCAGATATGCTTACAGGAAAGCCTATGCTGAGAAACGACCTAGAGTTAAGGGTAGATTTGTTAAGAGACAAGACTTAACCTCAGATGAAGCTGTGCCTCTCCCTTGA 1068 0.4494 MLKRDYPNNWVRLCDSCRVSASSLYCHTDSAYLCSSCDGQIHALGSPGWAHHRVKLCGACENAPVAFTCKADDASLCVDCDFEIHSANPIASRHNRVPVSPLSRILDDKMENPDEQPNYEVVGNNNNNISSKEMDEREADSWLLLGSADTIDSQVDDGFMFGETEDDHHAYVGFVEECDSSTKFKSLQEDRDQEQQTYSFSEEMIESDSVVPVQSVEADQPKQFQQQQNMYFNMEQKPSSRVAFTNYASNCRSVPVPYMDAQMLQRGTMSDMAGYRFAKGAEIFPSASVSMQMHHFGQMNRKAGVEKYREKKKSRKFEKRIRYAYRKAYAEKRPRVKGRFVKRQDLTSDEAVPLP 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0802 355 Pfam B-box zinc finger 54 99 IPR000315 GO:0008270
Mibi13g0802 355 Pfam B-box zinc finger 12 54 IPR000315 GO:0008270
Mibi13g0802 355 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270
Mibi13g0802 355 CDD Bbox1_BBX-like 56 99 - -
Mibi13g0802 355 Pfam CCT motif 301 343 IPR010402 GO:0005515
Mibi13g0802 355 ProSiteProfiles Zinc finger B-box type profile. 9 56 IPR000315 GO:0008270
Mibi13g0802 355 SMART bboxneu5 9 47 IPR000315 GO:0008270
Mibi13g0802 355 SMART bboxneu5 52 99 IPR000315 GO:0008270
Mibi13g0802 355 MobiDBLite consensus disorder prediction 108 127 - -
Mibi13g0802 355 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 14 345 IPR045281 GO:0009909
Mibi13g0802 355 CDD Bbox1_BBX-like 13 54 - -
Mibi13g0802 355 ProSiteProfiles CCT domain profile. 301 343 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0802 Mibi-ChrMibi13 10249414 10251160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0802 1 343 C2C2-CO-like Transcription Factor Family AT3G02380 38.968 1.17e-67 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Mibi13g0802 zf-B_box 4.4e-07 No_clan