Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0798 ATGGATGAATGCTCTCAACTGAGGGTGGCAATTGGCAAACAAATACTGAAATCTGCATCTCTGATTATATTTCTATCTTCAAAACCTCAGTTGATATATTTCTATTCTCTCTCACCAGCCTTGAAATTTTGGGACATGGAGGGCCATGAAGCTGAGAAACTCTATGGAGTAGCTAGTTCAAGCTCAACCCAGAATCCCCAAATTCCTTCTGCAACTCAGAAACCGATCATGAACATGGAAACAGTGCAAGAGTACCATGTGTTGGCTCATATGGATCAATTTAAAAGCCCACATTCCATTCCACTTTACTACTCATCACAAGTTCATCTTCCCAATACTCTGACTCAAATCCCATGGCACAAATCCTCTCCAAACACATCCCCTCTCAGTAACAACAATATTGAAGCAAAAGCTATTGTTGATGACCAGAAGAAAAGAAGAATGCTATCTAACAGAGAATCCGCGCGCAAATCACGAATACGGAAGAAACAACAAATAGAAGCCCTTCAGTTTCGTGTTAATGATCTGCAAGGTATGAATGATCAACTCTCCAGAAAGATAATCAGCTTACTGGAATGTAATCAGCAATTGCTTCAGCAGAATGTTCAGCTTAAAGAGAAGGTTTCCTCTCTGCAAGAAGCCCTCTCAGACTTGTTAGTCCCCAATGGCCCCATGGCAGAGCCTTCACAGGCATAA 696 0.4152 MDECSQLRVAIGKQILKSASLIIFLSSKPQLIYFYSLSPALKFWDMEGHEAEKLYGVASSSSTQNPQIPSATQKPIMNMETVQEYHVLAHMDQFKSPHSIPLYYSSQVHLPNTLTQIPWHKSSPNTSPLSNNNIEAKAIVDDQKKRRMLSNRESARKSRIRKKQQIEALQFRVNDLQGMNDQLSRKIISLLECNQQLLQQNVQLKEKVSSLQEALSDLLVPNGPMAEPSQA 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0798 231 Gene3D - 142 196 - -
Mibi13g0798 231 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 146 161 IPR004827 GO:0003700|GO:0006355
Mibi13g0798 231 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 73 222 IPR044521 -
Mibi13g0798 231 CDD bZIP_plant_GBF1 144 192 IPR045314 GO:0003700|GO:0006355
Mibi13g0798 231 Pfam bZIP transcription factor 143 201 IPR004827 GO:0003700|GO:0006355
Mibi13g0798 231 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 141 204 IPR004827 GO:0003700|GO:0006355
Mibi13g0798 231 FunFam BZIP transcription factor 141 192 - -
Mibi13g0798 231 Coils Coil 194 214 - -
Mibi13g0798 231 SMART brlzneu 139 203 IPR004827 GO:0003700|GO:0006355
Mibi13g0798 231 Coils Coil 166 186 - -
Mibi13g0798 231 SUPERFAMILY Leucine zipper domain 143 200 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0798 Mibi-ChrMibi13 10166837 10177117 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0798 141 221 bZIP Transcription Factor Family AT5G60830 56.790 1.10e-23 92.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mibi13g0798 bZIP_1 1.2e-12 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi13g0798 13 10166837 10177117 Mibi09g0025 09 555588 556205 CCT