Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0794 ATGGAGCACCCTCAAGCGCGTTCTTTTGGAACCGAAGCAAGAAAACCGACGCATGACTTTCTTTCACTGTACAGCCATTCTACCGCCCAGCAAGATCCGAGGCCACCATCTCAAGGAAGTTACCTGAAAACACATGATTTCTTGCAGCCACTAGAACGTGTTGATGAGAAGAAAGCAAACGCGAAGGAAGAAGTATCAGATGAGATATCATCCGTAGTTCAAAAGCCACCGCCACCCGCGCCGCCTCCGCCATGTGTTGAGCACACCTTACCTGGAGGAATCGGGACTTACAGTATCAGCCACATTTACTATAGTAATCACAGGGTTCCAAAGCCGGAGGCTTCTCTTTTCACTGTGTCTCCAGCTTGTGAAGCAAGTTCGGATAAAAATGAAGAGAATTCCAACTGCAGCTCATATACTGGAAGTGGCTTCAATTTGTGGGAAGAGTCTGCCGTTAAGAAGGGAAAGACAGGGAAGGAGAATGACGTGGTGAGAGAGAAACCCGTTATAGCAGAGTGTGCGGCTAAGCCAGGGCAGTGGTCGATGACTGAGAGAGCATCTCAGTCATCTGTGAAGAATAATCAGAATTGCTTCAATTCTATCACTTCCACTCAGAAAACTGGGCAAAAAAACCAGAGTTTTATTGATATGATAAAAGCAGCCAAGGATTGCTCTCAGGATGAGGAACTAGACAATGAAGAAGTATTCATTTTTAAGAAAGAATCCTCAAATAACCAAAGAGGCGAATTGAGGGTGAAAGTGGATGGGAAGAGTTCTGATCAAAGGCCAAACACACCACGATCGAAACATTCTGCAACAGAACAGCGTCGAAGGAGTAAAATTAATGACAGGTTCCAGATGTTGAGAGAGCTTATTCCACATAGTGACCAGAAAAGAGACAAGGCATCTTTTCTGTTGGAGGTCATTGAGTACATTCAATTTTTACAAGAAAAGGTTCATAAGCACGAAGGTTCATACCAAGTGTGGAATCAAGAGAAAGAAAAAGTGACTCCATGGAGGAATAATCAAAGGCCTTCAGAAAGCTATGATGATCAATCTCGTGTGATAAATAGTGGGTCTGGTCCTTCTTCAATATTACTGTTTCCTTCAAAGGTTGAGGAGGAAAATTTTAGCATCTCCCCAACAATTACTGGCGGCACAAAGAACGCAGCTGGTACTTGTTCTGCAGCTACATTAAAGGCAATGAATCAGCATCCTGCAATAACCAATAAGGCCATGCCAATTCCTAATTCTTCACAGCCAAATTTCTTCAATCATGGTCAAAGTGGAGGCCCAGGTAGATTGGCGTCTCAGCTCACACACAAGCCAACCTCAGATGCTGAAAACACCATATATAATCCCTTAGGACTATCTCAGACTCACTCACCTGCTACCGGGGTGACTGCAGCTAGTGATAAGCTTAAAGAGAAGGAGCTCAATATTGAAAGCGGTGCCATTAGCATATCAAGCATGTACTCAAAAGGGTTGTTGGACTCACTAACACAGGCACTGAAGAATTCAGGAGTGGACTTGTCACAGGCTAGCATCTCAGTCCAAATTGAGCTTGGTAAGCAAGCAAACATCAGACCAATTGGACCAACTCCTGGGGTTAAAGATGAAGTTACTTCTAGCAATCAAGGGGTGAAGCGCTCTAGAGTTTGTAACGTAGAGGACACTGACCTAGTAGTAAAGAAACTAAAGACAAGCAGAAGTTGA 1716 0.44 MEHPQARSFGTEARKPTHDFLSLYSHSTAQQDPRPPSQGSYLKTHDFLQPLERVDEKKANAKEEVSDEISSVVQKPPPPAPPPPCVEHTLPGGIGTYSISHIYYSNHRVPKPEASLFTVSPACEASSDKNEENSNCSSYTGSGFNLWEESAVKKGKTGKENDVVREKPVIAECAAKPGQWSMTERASQSSVKNNQNCFNSITSTQKTGQKNQSFIDMIKAAKDCSQDEELDNEEVFIFKKESSNNQRGELRVKVDGKSSDQRPNTPRSKHSATEQRRRSKINDRFQMLRELIPHSDQKRDKASFLLEVIEYIQFLQEKVHKHEGSYQVWNQEKEKVTPWRNNQRPSESYDDQSRVINSGSGPSSILLFPSKVEEENFSISPTITGGTKNAAGTCSAATLKAMNQHPAITNKAMPIPNSSQPNFFNHGQSGGPGRLASQLTHKPTSDAENTIYNPLGLSQTHSPATGVTAASDKLKEKELNIESGAISISSMYSKGLLDSLTQALKNSGVDLSQASISVQIELGKQANIRPIGPTPGVKDEVTSSNQGVKRSRVCNVEDTDLVVKKLKTSRS 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0794 571 MobiDBLite consensus disorder prediction 48 69 - -
Mibi13g0794 571 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 263 333 IPR036638 GO:0046983
Mibi13g0794 571 MobiDBLite consensus disorder prediction 247 282 - -
Mibi13g0794 571 SMART finulus 271 321 IPR011598 GO:0046983
Mibi13g0794 571 CDD bHLH_AtBIM_like 264 340 - -
Mibi13g0794 571 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 265 315 IPR011598 GO:0046983
Mibi13g0794 571 FunFam BHLH domain class transcription factor 263 335 - -
Mibi13g0794 571 MobiDBLite consensus disorder prediction 335 361 - -
Mibi13g0794 571 MobiDBLite consensus disorder prediction 1 89 - -
Mibi13g0794 571 MobiDBLite consensus disorder prediction 21 44 - -
Mibi13g0794 571 Gene3D - 263 337 IPR036638 GO:0046983
Mibi13g0794 571 MobiDBLite consensus disorder prediction 74 88 - -
Mibi13g0794 571 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 12 569 IPR044295 GO:0003700|GO:0006351|GO:0046983
Mibi13g0794 571 Pfam Helix-loop-helix DNA-binding domain 267 316 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0794 Mibi-ChrMibi13 10129860 10134731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0794 1 568 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G08130 46.350 9.25e-114 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi13g0794 HLH 2.7e-15 No_clan