Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0792 ATGCAGGAAATACATTCTATTGGCGGTGGTAGATTCTTCGATGGCGGCGGCGGCGGCGGTGGCGGCGGAGATAGGAGAGTGAGGTCGCACCAACACCACCACCAGAATAATCAACAGGCGTTGAAGTGTCCAAGGTGTGATTCACTCAACACGAAGTTCTGTTATTACAACAATTACAACCTCTCTCAGCCTCGCCATTTCTGTAAGAGCTGCCGCCGTTACTGGACCAAAGGCGGTGTCCTCCGAAACGTCCCCGTCGGCGGCGGTTGCCGGAAATCCAAGCGCTCCAAGCCTAAATCTGAACGTCCTCTCACGCCGACACCACCTCCGGCGACGGCGGCGCCGCCGGAGAACCGTAAGTCGAGCTCTCATTCAAGCAGCGAAAGCTCCAGCCTCGCCGCCGCCGCCGCGTCGGAGGCGTTATCGGCGCCGTCGTCGTCGAACCATGAAATTCTCACAAAGCAAACGACAAACCCTAATTTGGACTCAGGATTGATGGAACAAGGAGGAGATTGCGGAATTTTCTCAGAGATTGGAAGCTTCACGAGTTTGATCACAACGACGAGTGAAGCATTGTCGTTTGGATTCGGGAATATTCCGGAAACGACGTCGTTTCGGATGGGTGGGAGTGAGTTATTATCTGGGGGTGAGTGGCAGCAGGGACAGCAGAAGGAGACGGTGATGAGTGGTGTGATTTCTGAGCCGGAGATGATGACGGGATCGTTGATGGATCCGACGGTGGGGGTGGATTTGTCGGTTATGCAGGGGAAGAACGAGAACGGTGGATTTGGATCGTTGGATTGGCAGGGAGGGACAGAGCAAGGTTTGTTTGATCTGCCTAACACTGTTGATCATTCTTACTGGAGTCACACTCACTGGACTGATCAGGAAAATCCCACTCTCTTTCATCTTCCTTGA 918 0.537 MQEIHSIGGGRFFDGGGGGGGGGDRRVRSHQHHHQNNQQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKSKRSKPKSERPLTPTPPPATAAPPENRKSSSHSSSESSSLAAAAASEALSAPSSSNHEILTKQTTNPNLDSGLMEQGGDCGIFSEIGSFTSLITTTSEALSFGFGNIPETTSFRMGGSELLSGGEWQQGQQKETVMSGVISEPEMMTGSLMDPTVGVDLSVMQGKNENGGFGSLDWQGGTEQGLFDLPNTVDHSYWSHTHWTDQENPTLFHLP 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0792 305 MobiDBLite consensus disorder prediction 116 164 - -
Mibi13g0792 305 ProSiteProfiles Zinc finger Dof-type profile. 41 95 IPR003851 GO:0003677|GO:0006355
Mibi13g0792 305 Pfam Dof domain, zinc finger 39 95 IPR003851 GO:0003677|GO:0006355
Mibi13g0792 305 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 30 217 IPR045174 GO:0003700|GO:0006355
Mibi13g0792 305 MobiDBLite consensus disorder prediction 85 165 - -
Mibi13g0792 305 ProSitePatterns Zinc finger Dof-type signature. 43 79 IPR003851 GO:0003677|GO:0006355
Mibi13g0792 305 MobiDBLite consensus disorder prediction 1 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0792 Mibi-ChrMibi13 10079129 10080046 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0792 24 305 C2C2-Dof Transcription Factor Family AT5G60850 43.564 1.46e-56 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mibi13g0792 zf-Dof 2.3e-33 No_clan