Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0787 ATGGATTCTTGGAGTTATGGTTCTGAAGAGAAAGGGTTTGTGCCCAACGATAACACACTTTCCAGAAGTAAAGGTTCCATCTTGGGATGGGAATTGAAGAGTTCTTCTGGTATTTCCAGCGATATGTTATCCACTGGTCAACCAAACATAGGAAATCAAGGTCTTGAGGAAATGGGTTTTCCAGAAATGTTGGGGAAACAATTGTCCGATGATCCAATTAGCAGTATGTCGAACAGAAAGCTCGAAGGTGGTCCTTTTATGTCTGCCGCTCCAATTGCAATTTCTGGAGTTGAAGATTCCAATTCGAAGCTTTCTAACTCTGTGGTTGAATCTAACGGTCGAGATTCGCTCATTGATTTGAAGCTGGGACGATTTGGTGATCCCAGAGAAGCCTTGGATTCAGCATTCTCCAAAGGAACCCCTATCTTGTCTTCTTCAGAATCATCGGCTCCGACCAAGAGAGTACGAGGTTCTGGTTCTGGGGTTCATTCACAAACCGCGTACTGTCAAGTTTATGGATGTAATAAAGATCTGAGCGGCTCAAAAGACTACCACAAGAGGCACAAAGTTTGTGAGGTTCACTCCAAGACTTCCAAAGTTATAGTCAACGGCATCGAACAGAGATTTTGTCAGCAATGTAGTAGGTTTCACTTGCTGGCTGAATTTGATGATGGTAAGCGAAGCTGTCGCAAACGCCTTGCAGGTCATAATGAGCGCCGGCGAAAGCCACAAGTTGGTATTCACTCTGGAAAGGCTGGAAGATTGCTACAATCATACAGTGATAGCAGATTCCAGGGCACCATGCTAGCAACTGCATCTTTTATTTGTCAAGATATACTTCCTACAGGGACTTTGCGCTCCGATAAATGTGGAACAAATGACTGGTGGAGGCCACTAAAGAATGAAGATGGGACCCATTTTAGGCATCTTTCTGGAGTTCCTATCACAAATGGACACCATCAGTCAAGATCTCTATTCCCTTCATATAATGAAAGACAGTTCCCTTTTCTTCATGAAAACGGCGCTACATCCAGCACGGGAAGCATCTTCTGTGAGAACAACAGTCAGTATCCGCCTCCTCCTGCCATGGGCACTAATTCTGGGGCACAATCTTTATTCCAAGACACTTCCTTAAGAAGTGAGGACTTCAATGTTTATGATACTACGTCAACAACAATTCAAGGACTATCGGGAGTTTCAGACTCTGGCTGTGCTCTCTCTCTTCTGTCATCTCAATCCCAGAACTCTTCCAGCCACTCCTCAGGAATCCCCATGGCTGCTTGCCCCTTGGTCATTCCAAGCAGTAGCCATAGTAATTACAGCCCTAGTCAGCTCACCGAGAAGATCATAGGAATGAGCTCACATGCTTCTTCAACAAGTGCAGGAGTTTCAGATAGGTTTCAATCCGAGATGAATACTGCCGCCAATGATGGAAGTCATCTTAATCCCGTACTTATATCAGACAATAGTAATATTCTCCATTTTGATATGGCAGATAGCATGTTCCAAGGGCCTGGTTTTGTGAATATGAAAGATGGCCCAACTATTGACTTGCTTCAACTTTCATCACAGCTTCAGCGGGTTGAGCATCAGAGGCAATCCTCACAGGCGAAGCGAGAAAATGATTCTACTTAG 1635 0.444 MDSWSYGSEEKGFVPNDNTLSRSKGSILGWELKSSSGISSDMLSTGQPNIGNQGLEEMGFPEMLGKQLSDDPISSMSNRKLEGGPFMSAAPIAISGVEDSNSKLSNSVVESNGRDSLIDLKLGRFGDPREALDSAFSKGTPILSSSESSAPTKRVRGSGSGVHSQTAYCQVYGCNKDLSGSKDYHKRHKVCEVHSKTSKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQVGIHSGKAGRLLQSYSDSRFQGTMLATASFICQDILPTGTLRSDKCGTNDWWRPLKNEDGTHFRHLSGVPITNGHHQSRSLFPSYNERQFPFLHENGATSSTGSIFCENNSQYPPPPAMGTNSGAQSLFQDTSLRSEDFNVYDTTSTTIQGLSGVSDSGCALSLLSSQSQNSSSHSSGIPMAACPLVIPSSSHSNYSPSQLTEKIIGMSSHASSTSAGVSDRFQSEMNTAANDGSHLNPVLISDNSNILHFDMADSMFQGPGFVNMKDGPTIDLLQLSSQLQRVEHQRQSSQAKRENDST 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0787 544 MobiDBLite consensus disorder prediction 137 161 - -
Mibi13g0787 544 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 56 537 IPR044817 GO:0003677
Mibi13g0787 544 SUPERFAMILY SBT domain 167 247 IPR036893 GO:0003677|GO:0005634
Mibi13g0787 544 MobiDBLite consensus disorder prediction 1 23 - -
Mibi13g0787 544 MobiDBLite consensus disorder prediction 138 161 - -
Mibi13g0787 544 Gene3D - 159 230 IPR036893 GO:0003677|GO:0005634
Mibi13g0787 544 FunFam Squamosa promoter-binding-like protein 14 160 230 - -
Mibi13g0787 544 ProSiteProfiles Zinc finger SBP-type profile. 166 243 IPR004333 GO:0003677
Mibi13g0787 544 Coils Coil 518 544 - -
Mibi13g0787 544 Pfam SBP domain 169 242 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0787 Mibi-ChrMibi13 10020459 10023588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0787 118 532 SBP-box Gene Family AT1G69170 35.646 2.02e-51 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mibi13g0787 SBP 8.5e-32 No_clan