Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0747 ATGCACCCTCCGTTTCATTCTTCCTTCTTCTCTCATCAGCCCTATCCTTCTGAATCATTCTTCTCCAATTTTCCCTCCTTCCCATTGGATTCCCCTCCTCCTCCTGGATCCAACCGCCAAGGAAATTCGACCTTATACGCCTCTGCTTATGGGCACCAATCAGTTCATTCTCTGGACGCTGCTGCCAAAGCTTCTCTTGGGACTTCAGCTGTGTCTGCAGATTTGTTTCCTTCTGCGTGTAATGACATCTGGGTGGATCAACTTTTGCCTAGTCTTACCCCAGTAATGTTGCCTATGCCAAATCAAACTAAAACTTATGAACCGATGTTAGATGAGGTTTGCAAAATTGATTGCAGTAGCAAAGATGTTTTTGGAAATCACGTATGTGGAGGGAAGAACAAGAGGAATATGCAGTTTTTAAATAACCCCACCAATATAATCATACCAGGAACCTCTCATGCAAGTTTACAAAGTCAAAGAAGTAGGGTCCGAAGACAGGATTTATTTGGTGCAGTGAACAAAGAGTTAGAGTTTAAAAAACAGAATCTTGTGAAGAGCGGTGCAGCAGTTCATTCAGGGAGGGTTTGCACGATATGTAACATCGCTTGCAATAGTCAAGATGTATATAATGAACATCTATCTGGGAAAAAGCATGCTGCTCAGATTAGCTTGATGTGTGGTAATGGAACTGGTCCTTATGTTGCTGCTTTTAAGCGTCATGGTCTTGGTCATTGGAAAAAAGTCCCAAAGAAAATTAAGTTTACTCAACCTGCATGGTGTGAACTTTGCAAGATCAGTTGTACGGGCAGGGATACATATATGACACACTTGGCTGGGAAGAAACACCTGAGGAACCTAGAGTTGCTGTCAAAATCAAATAATGTTTTACAAGTTGCAACCAATCCAGTTATTGGCCAAGGAAAACCGAGTACTTGTAAAGTTGAAGGGATTGTTTCACATCAGCCAAATAGATATGCCATGGTAGATGATATTGAAGCAAAGAAACGTAAACTTGTGGAAGGTGGGGCCGCAGAAACTGATATTAGAATATGCACTCTATGTAATGTGGTGTGCAACAGCCAAACGGTGTTTTATTTTCACCTTACTGGGCAGAAACATGCTGCTATGGTGAAGCTGAAGCAGGAGCTGACAGGATTGCTTGCAGAAATGTCAAATGACTTCAGAAGTGACATTGATACTTCTTTTAATGCGGAGGAGCTCTTGAAAATTAAAACAAGATGTAGAGAGCTTAGAAAAGAGAAGGACATGATAAATAATTCTCAATCCCAAATCTTTGAGCTGCTCCGGATAGTAGAACTACATGAGAAGTCATTATCAGCGGCTAACATAGAAGATAAGAAACACGTACAGAGGTTCGAAGAAGAGCTGATGAACTGCTCTCAAGAAATAGATTACCTCAAGAATCAACTTAAGGGAAGAAACATGGAGGTGAAATACCTGCAAGAGCTTGTTTACAGCCTCAAATTGAAAATAAAGGATATGGAAGGCTTACAAGATGAGGTTTCCAGGTTAAAGGATGAGCTGCAGAGATCCAATTATGAGCAATTTTTCTTGTTGAAGGAATTAGAGACTAAAGAAATGGAATTGGAGAAGTCAACACTGACCGTAGAGAAATTGGAGGAATCAATTTCATCCATGACATTAGAGTCTGAATGTGAAGTAGAGTGCATGAAGCTTGACATGATGGCCTTGGAGCAGAGTCATTTTGAGGCTAAGAAAATACAGGAGGAGACTCTAGAGGAAAACACTAGAATGAGTAGATTGATTGAAGAGCTGCAGTTTAAATTTCAGGAAGCCCTACATAGTATTGTCTCTCTAAATGAGGAAAATATTAAACTTAGGAATAAGGTCGATGTTGTCAACATGAACACGAGGAATTTTTCTCAAAAGGTTGAAGAGTGGCTAGAAAACAAGGACAGATCACAACTCAATGGTCAGTCTTCCTTGAGCAAACAAGAGAAAGATTCAGACATATCAAAGGATATAAGTGTTTATGGAGAAGTGTTGGGCCCACTCCTTGGAAGGCTATCATTGGCGTTGGAAACAGATGCCGGTATTAAAGACGAGATGGATAAGATGTCATATCAGATGCAAAAGTATAAAATACTTGTGGAGAAACTTAAGGAAGAATTAAGAGAAGAAAAGTTGAAGGCCAAAGAAGAAGCGGAGGAACTTGCTCAAGAAATGGCAGAGCTTAGATATGAAGTTACAAGTTTGTTAGAAGAAGAATGTAAGCATCGTGCTTGCTTTGAACAGGCATCTTTGCAAAGAATTGCCGAGTTAGAAGCACAGCTTCAAAGAGAACAGAGAAAATCTTTATTTGCTGTCAGCGGTCTCCCTGAAATGTAG 2370 0.4025 MHPPFHSSFFSHQPYPSESFFSNFPSFPLDSPPPPGSNRQGNSTLYASAYGHQSVHSLDAAAKASLGTSAVSADLFPSACNDIWVDQLLPSLTPVMLPMPNQTKTYEPMLDEVCKIDCSSKDVFGNHVCGGKNKRNMQFLNNPTNIIIPGTSHASLQSQRSRVRRQDLFGAVNKELEFKKQNLVKSGAAVHSGRVCTICNIACNSQDVYNEHLSGKKHAAQISLMCGNGTGPYVAAFKRHGLGHWKKVPKKIKFTQPAWCELCKISCTGRDTYMTHLAGKKHLRNLELLSKSNNVLQVATNPVIGQGKPSTCKVEGIVSHQPNRYAMVDDIEAKKRKLVEGGAAETDIRICTLCNVVCNSQTVFYFHLTGQKHAAMVKLKQELTGLLAEMSNDFRSDIDTSFNAEELLKIKTRCRELRKEKDMINNSQSQIFELLRIVELHEKSLSAANIEDKKHVQRFEEELMNCSQEIDYLKNQLKGRNMEVKYLQELVYSLKLKIKDMEGLQDEVSRLKDELQRSNYEQFFLLKELETKEMELEKSTLTVEKLEESISSMTLESECEVECMKLDMMALEQSHFEAKKIQEETLEENTRMSRLIEELQFKFQEALHSIVSLNEENIKLRNKVDVVNMNTRNFSQKVEEWLENKDRSQLNGQSSLSKQEKDSDISKDISVYGEVLGPLLGRLSLALETDAGIKDEMDKMSYQMQKYKILVEKLKEELREEKLKAKEEAEELAQEMAELRYEVTSLLEEECKHRACFEQASLQRIAELEAQLQREQRKSLFAVSGLPEM 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0747 789 SUPERFAMILY beta-beta-alpha zinc fingers 347 380 IPR036236 -
Mibi13g0747 789 SUPERFAMILY beta-beta-alpha zinc fingers 191 223 IPR036236 -
Mibi13g0747 789 Coils Coil 456 476 - -
Mibi13g0747 789 Coils Coil 758 778 - -
Mibi13g0747 789 PANTHER MYOSIN HEAVY CHAIN-LIKE PROTEIN 390 788 - -
Mibi13g0747 789 SMART c2h2final6 194 218 IPR013087 -
Mibi13g0747 789 SMART c2h2final6 349 373 IPR013087 -
Mibi13g0747 789 SMART c2h2final6 258 282 IPR013087 -
Mibi13g0747 789 Coils Coil 596 616 - -
Mibi13g0747 789 Coils Coil 494 521 - -
Mibi13g0747 789 Pfam Zinc-finger of C2H2 type 259 282 - -
Mibi13g0747 789 Pfam Zinc-finger of C2H2 type 351 373 - -
Mibi13g0747 789 Pfam Zinc-finger of C2H2 type 196 218 - -
Mibi13g0747 789 Gene3D Classic Zinc Finger 246 288 - -
Mibi13g0747 789 Gene3D Classic Zinc Finger 332 382 - -
Mibi13g0747 789 Gene3D Classic Zinc Finger 174 224 - -
Mibi13g0747 789 SUPERFAMILY beta-beta-alpha zinc fingers 242 289 IPR036236 -
Mibi13g0747 789 Coils Coil 529 556 - -
Mibi13g0747 789 Coils Coil 697 749 - -
Mibi13g0747 789 SMART ZnF_U1_5 255 289 IPR003604 GO:0003676|GO:0008270
Mibi13g0747 789 SMART ZnF_U1_5 346 380 IPR003604 GO:0003676|GO:0008270
Mibi13g0747 789 SMART ZnF_U1_5 191 225 IPR003604 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0747 Mibi-ChrMibi13 9549053 9557285 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0747 175 399 C2H2 Transcription Factor Family AT5G61190 24.242 2.99e-08 55.5