Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0738 ATGACTGAACCTTTGCTTCCAAACTCCATTCTCACTCCTCAACAAACACAACTCATGGATTCTCTCCCTCCTGTCCCCATGTCTAATTATGAGGTTGCAGAGCTAACCTGGAAAAACGGTCAGCCTGTCATGCATGGGCTTAATGGGCTCTTACCAACGGCCAACCGGAAGCCCAATTGGATTAAGGCCCATGATACTCTAGAGTCCATTGTGCAACAAGCTACTACATGCCCACGTCGTCAAAAGTCAAACTTCATGATGATGATGATGCCACAGGATCATAACCATACCCCTTCTAGTATTAGCTCCACCATGGCACCCTCCGCCGGCAGGACAGCATTGCCACCTGATAGATCCGGCCAAGCACAATCGGAGCCGGCGAGGAAGCGGGTCCAGTCGGATTCCGGCTACCTTGGTGGTCAAGGTTTAGAAGATTGTGAACCTAGTAGTGGAGGTTGTGCTAGTGTCAGCGCCACGTTTTGTAGAAGCTTCAAGAGAAGTAAAACACTTGAGGATGATTCCCCTTCTCTCTATGATTCGGAAAACCAAGACCAAGAAGAAGACAGGGACACTAAGGAAGAAACAGGACGTTCCAACTCAACAAGAAGAAATAGAACAGCGGCTATCCATAACCAGAGTGAGCGGAGACGAAGGGATAGAATTAATCAGAAAATGAAAGCTTTGCAAAGGTTGGTGCCTAACGCCAGCAAGAATGATAAAGCTTCAATATTAGATGAAGTGATTGAATATTTAAAGCAGCTCCAAGCACAGATACAGATGATGATGAATATGAGAAACATGCCACAGCAAATGATGATGATGATGATGCAACAACAGCTTCAGATGTCTATGCTGGCTAGAATGGGCCTTGGTCTGGGCTCGGGCCCGAGCCAAGGCCCACCAGGCATGGGCCTTGCACGCCCGCCGGTTCTTCCTTCTCTTCCACAACAACTCACAGTTGCAGCTTCTGCTATGAATCCTTCCTTCATGATGTCTCCATTGGTTCAAGCTCACGCTACTCTTCCAAAGCCTGAACCTTCATCTGCAGCTACCTCCAATGCTTCAGTTCCTTTGCCTGATCCTTATACCACTTTCCTTTCACAATCAGTTAATATGGATATTCTAAGCAACATGGCGGCGCTTTACCGGCAACAGATGAGACAGAACAGTCAGAACATGAGCAGCCCTACACAGCAACATCATGGACAAGGGAACTGA 1218 0.4754 MTEPLLPNSILTPQQTQLMDSLPPVPMSNYEVAELTWKNGQPVMHGLNGLLPTANRKPNWIKAHDTLESIVQQATTCPRRQKSNFMMMMMPQDHNHTPSSISSTMAPSAGRTALPPDRSGQAQSEPARKRVQSDSGYLGGQGLEDCEPSSGGCASVSATFCRSFKRSKTLEDDSPSLYDSENQDQEEDRDTKEETGRSNSTRRNRTAAIHNQSERRRRDRINQKMKALQRLVPNASKNDKASILDEVIEYLKQLQAQIQMMMNMRNMPQQMMMMMMQQQLQMSMLARMGLGLGSGPSQGPPGMGLARPPVLPSLPQQLTVAASAMNPSFMMSPLVQAHATLPKPEPSSAATSNASVPLPDPYTTFLSQSVNMDILSNMAALYRQQMRQNSQNMSSPTQQHHGQGN 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0738 405 MobiDBLite consensus disorder prediction 90 149 - -
Mibi13g0738 405 MobiDBLite consensus disorder prediction 169 220 - -
Mibi13g0738 405 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 208 283 IPR036638 GO:0046983
Mibi13g0738 405 SMART finulus 211 260 IPR011598 GO:0046983
Mibi13g0738 405 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 205 254 IPR011598 GO:0046983
Mibi13g0738 405 Gene3D - 200 266 IPR036638 GO:0046983
Mibi13g0738 405 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 32 394 IPR031066 -
Mibi13g0738 405 CDD bHLH_AtPIF_like 205 264 - -
Mibi13g0738 405 Pfam Helix-loop-helix DNA-binding domain 210 255 IPR011598 GO:0046983
Mibi13g0738 405 MobiDBLite consensus disorder prediction 90 109 - -
Mibi13g0738 405 Coils Coil 211 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0738 Mibi-ChrMibi13 9478233 9481399 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0738 25 268 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00050 43.798 8.38e-42 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi13g0738 HLH 1.3e-14 No_clan