Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0734 ATGTCAGAGCATGTATCAGATTCCTGGGGATTACTGTTAATCTGTTCCTTAATCCTTTTCTCAGCAGGTAAAATAGTTGCCGGAGATTCTCTGGACACAGACAGAGAAGTACTGCTTCAGCTCAAAGCATATCTCAACGATCAAACTTTAGTAGACCAGGGAAGATACACAAACTGGAGCACCACAAGTTCCAATCCTTGTGACTGGTTGGGAATCTTGTGCAATGGAACAACGAGGAGGGTGGTCGGAATTGATCTCTCCGAGAACAAAATCACTGGAAAGATATTTCAGAACTTCTCTTACCTCACTCAGCTCGCACACCTTGACCTTTCTCAGAACACACTATCTGGCGAGATTCCGGGGGACTTAAGGCGGTGCAAAAAGCTCAAGTATCTCAATCTCTCCCACAATATTCTTCCAGAAGAGTTGAATTTGATTGGATTGACAAACTTGGAAATTCTTGACTTATCAGGCAACAGGCTTTATGGGGATATTGGGTTTAATTTCCCTGCCATTTGTGACAATCTGGTCAGTTTGAATATCTCAGGGAATAACTTCACCGGTAGGATTGATGAGTGCTTCAATCAGTGTTTGAAGTTGCAGTACTTGGATTTGAGTACTAATAAGCTGAGTGGAGATTTGTGGACGGGGATTTCAAAGCTCAGATCTTTTTCTGTTTCAGAGAATTTTCTCAGTGGGGGAATTCCTCCATCAGTTTTTCCAGTGAACTGCAATCTTGAAGTTCTTGACATTTCAGAGAATATGTTCATAGGGAATCTCCCTAAGGAGGTTGCTAACTGCAAGAATTTAACGACTCTGAATCTATCTAGCAACAGATTCAATGGATCAATACCAAAAGAAATCGGTTCAATTTCTGGGGTAGAAGCTTTGTACTTGGGGAATAATAGTTTCTCAAGAGATATCCCAGAAGAGCTCTTGAACTTGACCAAATTGGTGTTCTTGGATTTAACTAGAAATCATTTTGGTGGGGACATACAAGAGATATTTGGGAGATTCAAGCAGGTGAAGTATCTTCTATTACACTCAAATTCTTACACTGGAGGATTATCTTCGTCAGGGATTCTCACATTACCAAACGCTCTACGTTTGGACCTAAGCAACAACAGTTTCTCAGGTCCATTGCCCACGGAAATCTCTCAAATGTCAAGCCTCAAGTTATTAATGTTAGCCTACAATCAATTCACAGGACCTATTCCACCTGAATTTGGAAACTTGCCTCAACTTCAAGCTCTTGATCTATCATTCAACAACTTATCTGGGCAAATCCCACCATCTCTTGGAAACTTAACCTCTCTTTTATGGCTAATGCTCGCAAACAATTCATTAACAGGTGAAATCCCAAGAGAATTGGGGAACTGTTCGAGCTTATTATGGCTAAACCTTGCAAACAATAAACTCACGGGGAAATTCCCACCTGAATTGGCCAATATAGGGAGAAAAGCCATGGCCACATTTGAATCGAATAGGCAATATGACACAGTCAGTGCTGGCTCTGGTGAATGCTTGGCCATGAAGAGATGGATTCCTGCAGATTACCCTCCATTTAGTTTTGTTTATGACATCCTCACGAGGAAGAATTGCAGAAGCACTTGGGATAGACTGCTTAAAGGGTATGGGATCTTCCCAATTTGTAGTGCAGGTTCATTTTCACCAATGTCTCAAATCTCTGGTTATGTTCAGCTAAGTGGGAACCAACTCACTGGTGAAATCCCTCCAGAGATTGGAACAATGATGAACTTCAGCATGTTGCATTTGGGTTTTAATAAATTCTCCGGGGAATTACCCTCAGAGGTGAAAAGTATGCCACTTGTGGTGTTCAACATAACAAGAAATGATATTTCTGGGGAGATCCCTTGGGAAATTGGAACCATGAAGTGTTTAATGAATCTTGATCTCTCCTACAACAATTTTTCTGGGGTTTTCCCTTCAAGTTTGAGCAGCTTAACAGAGCTCACAAAGTTCAACATTTCTTACAATCCCTTGATTTCAGGTGAGATTCCAACGACAGGACAACTAGCGACTTTCGAGAAATACTCATATTTGGGAGATCCCCTCTTAGATCTCCCAAGTTTCATCGACAATCCCACCGATGGTCATAAAAACACAACCTTTCGAAACAGAGACATACAAAAATCACCAAATCCCTCTCTTTTTCTGGTGATCTTCGCTGTCATTCTGGCTTTCTTAGTATTCAGTCTTCTTACTCTGATAGTCTGTCGACTGATAAAAAGCCCATCAGAAGAACCACTCCTTATAGACATAAAAATCGACCATGATTCTGGAACCTCGTCCCCATGGTTATCAGACACAGTTAAGGTTATTCGATTGGACAGGGCAGCTTTCACACATGCTGACATCTTGAAAGCCACAGGAAACTTCTCAGACGACAGGATTATAGGCAAAGGAGGGTTCGGAACAGTGTACAGAGGAGTATTTTCAGATGGGAGAGAAGTGGCAGTGAAAAAGCTCCAAAGAGAAGGACTTGAAGGAGAGAAAGAATTCAGAGCAGAAATGGAAGTTCTTTGTGGCCATGGCTTTGGTTGGCCCCACCCAAACCTCGTCACACTCTATGGTTGGTGCCTAGACGGTTCAGAAAAACTACTTGTTTATGAATACATTTCAGGTGGAAGCCTAGAAGATCTTGTAACAGACAGAACAAAATTCACTTGGAAACGAAGGCTAGAAGTGGCCATTGATGTTGCCAGAGCTTTGGTTTACTTACACCATGAATGTTACCCTTCAATTGTTCATAGGGATGTGAAGGCAAGCAATGTGTTGTTGGATAACAAAACAGGGAAGGCAAAAGTTACAGACTTTGGACTAGCCAGGGTGGTTGACATTGGGGACAGCCACGTCAGCACTATGGTGGCCGGGACGGTGGGGTACGTGGCGCCAGAGTACGGGCACACGTGGAAGGCGACGACGAAAGGGGATGTGTATAGTTATGGGGTGTTGGCTATGGAGTTGGCAACTGGAAGAAGAGCATTGGATGGAGGGGAAGAGTGTTTGGTGGAGTGGGGAAGGAGGGTGATGGGTCATGGAAGGAATAGGCCAATCGGCCGGCTGGTGATTCCGGTGTTGCTGATGGGTTCTGGTTTGCTTGAAGGTATGGAGGAGATGGTGGAGTTGTTAAGGATTGGTGTGAGGTGCACTGCTGAGACGCCTTCGGCTAGGCCAACAATGAAGGAGGTTTTGGATATGTTGATCAAGGTGTATAACTCTAGGGAGGAGGATTATTCAAGTTCAAGTTATGAGAATCTTAGTCATTAG 3291 0.4312 MSEHVSDSWGLLLICSLILFSAGKIVAGDSLDTDREVLLQLKAYLNDQTLVDQGRYTNWSTTSSNPCDWLGILCNGTTRRVVGIDLSENKITGKIFQNFSYLTQLAHLDLSQNTLSGEIPGDLRRCKKLKYLNLSHNILPEELNLIGLTNLEILDLSGNRLYGDIGFNFPAICDNLVSLNISGNNFTGRIDECFNQCLKLQYLDLSTNKLSGDLWTGISKLRSFSVSENFLSGGIPPSVFPVNCNLEVLDISENMFIGNLPKEVANCKNLTTLNLSSNRFNGSIPKEIGSISGVEALYLGNNSFSRDIPEELLNLTKLVFLDLTRNHFGGDIQEIFGRFKQVKYLLLHSNSYTGGLSSSGILTLPNALRLDLSNNSFSGPLPTEISQMSSLKLLMLAYNQFTGPIPPEFGNLPQLQALDLSFNNLSGQIPPSLGNLTSLLWLMLANNSLTGEIPRELGNCSSLLWLNLANNKLTGKFPPELANIGRKAMATFESNRQYDTVSAGSGECLAMKRWIPADYPPFSFVYDILTRKNCRSTWDRLLKGYGIFPICSAGSFSPMSQISGYVQLSGNQLTGEIPPEIGTMMNFSMLHLGFNKFSGELPSEVKSMPLVVFNITRNDISGEIPWEIGTMKCLMNLDLSYNNFSGVFPSSLSSLTELTKFNISYNPLISGEIPTTGQLATFEKYSYLGDPLLDLPSFIDNPTDGHKNTTFRNRDIQKSPNPSLFLVIFAVILAFLVFSLLTLIVCRLIKSPSEEPLLIDIKIDHDSGTSSPWLSDTVKVIRLDRAAFTHADILKATGNFSDDRIIGKGGFGTVYRGVFSDGREVAVKKLQREGLEGEKEFRAEMEVLCGHGFGWPHPNLVTLYGWCLDGSEKLLVYEYISGGSLEDLVTDRTKFTWKRRLEVAIDVARALVYLHHECYPSIVHRDVKASNVLLDNKTGKAKVTDFGLARVVDIGDSHVSTMVAGTVGYVAPEYGHTWKATTKGDVYSYGVLAMELATGRRALDGGEECLVEWGRRVMGHGRNRPIGRLVIPVLLMGSGLLEGMEEMVELLRIGVRCTAETPSARPTMKEVLDMLIKVYNSREEDYSSSSYENLSH 1096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0734 1096 Gene3D Ribonuclease Inhibitor 241 330 IPR032675 -
Mibi13g0734 1096 SUPERFAMILY Protein kinase-like (PK-like) 785 1075 IPR011009 -
Mibi13g0734 1096 PRINTS Leucine-rich repeat signature 148 161 - -
Mibi13g0734 1096 PRINTS Leucine-rich repeat signature 105 118 - -
Mibi13g0734 1096 Gene3D Transferase(Phosphotransferase) domain 1 880 1094 - -
Mibi13g0734 1096 Gene3D Ribonuclease Inhibitor 170 240 IPR032675 -
Mibi13g0734 1096 FunFam serine/threonine-protein kinase BRI1-like 2 761 879 - -
Mibi13g0734 1096 Pfam Leucine Rich Repeat 175 196 IPR001611 GO:0005515
Mibi13g0734 1096 Pfam Leucine rich repeat N-terminal domain 32 75 IPR013210 -
Mibi13g0734 1096 ProSiteProfiles Leucine-rich repeat profile. 128 149 IPR001611 GO:0005515
Mibi13g0734 1096 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 236 332 - -
Mibi13g0734 1096 Gene3D Ribonuclease Inhibitor 610 692 IPR032675 -
Mibi13g0734 1096 ProSiteProfiles Protein kinase domain profile. 800 1076 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0734 1096 ProSitePatterns Serine/Threonine protein kinases active-site signature. 922 934 IPR008271 GO:0004672|GO:0006468
Mibi13g0734 1096 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 880 1083 - -
Mibi13g0734 1096 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 148 1075 - -
Mibi13g0734 1096 SUPERFAMILY L domain-like 260 354 - -
Mibi13g0734 1096 Pfam Protein kinase domain 801 1072 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0734 1096 Gene3D Ribonuclease Inhibitor 30 169 IPR032675 -
Mibi13g0734 1096 ProSitePatterns Protein kinases ATP-binding region signature. 806 829 IPR017441 GO:0005524
Mibi13g0734 1096 SMART LRR_typ_2 631 654 IPR003591 -
Mibi13g0734 1096 SMART LRR_typ_2 412 435 IPR003591 -
Mibi13g0734 1096 SMART LRR_typ_2 388 411 IPR003591 -
Mibi13g0734 1096 SMART LRR_typ_2 291 315 IPR003591 -
Mibi13g0734 1096 SMART LRR_typ_2 148 179 IPR003591 -
Mibi13g0734 1096 SMART LRR_typ_2 436 460 IPR003591 -
Mibi13g0734 1096 SMART LRR_typ_2 102 126 IPR003591 -
Mibi13g0734 1096 SUPERFAMILY L domain-like 358 693 - -
Mibi13g0734 1096 CDD STKc_IRAK 806 1077 - -
Mibi13g0734 1096 Gene3D Phosphorylase Kinase; domain 1 769 879 - -
Mibi13g0734 1096 FunFam Putative LRR receptor-like serine/threonine-protein kinase 339 500 - -
Mibi13g0734 1096 Gene3D Ribonuclease Inhibitor 552 608 IPR032675 -
Mibi13g0734 1096 Pfam Leucine rich repeat 84 137 IPR001611 GO:0005515
Mibi13g0734 1096 Pfam Leucine rich repeat 369 425 IPR001611 GO:0005515
Mibi13g0734 1096 Pfam Leucine rich repeat 269 328 IPR001611 GO:0005515
Mibi13g0734 1096 Gene3D Ribonuclease Inhibitor 331 515 IPR032675 -
Mibi13g0734 1096 SMART serkin_6 800 1077 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0734 1096 SUPERFAMILY RNI-like 73 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0734 Mibi-ChrMibi13 9444721 9448264 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0734 35 1078 Receptor kinase-like Gene Family AT4G39400 32.856 3.58e-150 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Mibi13g0734 Pkinase 1.7e-44 CL0016