Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0731 ATGGGTTGTGTCAATTCAAGGCAGACAGTGTCGGTGACGCCGGCAGTAGATCACTCCGATCTGTTTCAGGGCAATGTAAGTTTGGGGCATTCAGGAAGAAGCTTAGGAGAGTTCAATGGTAGTACTAAGAAGAAGAAGACGAAGAAGAGTGAGTCAGATAGAGAAAGTTCAAATTTTGGGTGTGAAGAATCTTTGAGCTTCAGATTGGGGAATCTGCAGAAATATGTAGAAGGTGAACAAGTCGCCGCCGGTTGGCCGGCGTGGCTCACCGCCGTCGCCAGTGAAGCCATTCACGGCTGGGTTCCTCTCCGAGCTGATGCATTTGAGAAGCTTGAGAAGATTGGGCAGGGGACATATAGTAGTGTGTTTAGAGCGAAGGAGCTTGAGACAGGGAAGATAGTGGCATTGAAGAAGGTGAGGTTTGATATATTTGAGCCAGAAAGTGTGAGGTTTATGGCAAGAGAGATAATGATTCTGAGGAGGCTTGATCATCCGAACATAGTGAAATTGGAGGGTTTGATTACTTCCAAGTTGTCATCTAACATATACCTTGTGTTCGAGTACATGGAACATGACATCACAGGGCTCTTGTCCAGCCCTGATGTCAAATTTAGTGAATCTCAGATTAAATGCTACATGAAACAGCTATTATCTGGGCTTGATCATTGTCATTCGCGCGGTGTAATGCATCGAGATATCAAAGGATCAAATCTTCTGGTGAACAATGAAGGGATACTAAAAGTTGCTGATTTTGGATTGGCAAAATTCTCTGTTTCTGGGAACAAACAGCCCCTCACTAGCCGAGTTGTCACTTTGTGGTACCGTCCTCCTGAACTTTTGCTTGGTTCGACAGATTATGGTCCCTCTGTGGATCTATGGAGTGTTGGCTGTGTATTTGCGGAGCTTCTTTTTAGAAAGCCAATTCTTCAGGGAAGAACAGAGGTGGAACAATTGCACAAAATTTTCAAACTTTGTGGCTCCCCACCTGATGAATACTGGAAAAAGACCAAGCTTCCTCATGCAACTTTGTTTAAGCCCCAGCAAACATACAATAGTTGCCTCCAAGAGACCTTTATTGATTTTCCCACAGCTACTGTGAATCTTCTTCAAACTCTACTTTCCATTGAATCATACAAGCGTGGAACTGCTTCGTCTGCCCTTTCATCTGAGTATTTCAAGACAAAGCCTTATGCATGCGAGCCGTCAAGCTTGCCCATATACTCACCTAGCAAGGAGATTGATGCAAAACACTGGGAGGAATCAAGAAGGAAAAAGATCGGTGGAAGAGCTCGTGGACCTGAAACAAGAAAATCATCAAGAAAGCCACCAGGATTCAGTAAACTGGCCCCGGCAGAGAGTTTGGTTAATCAAACTCGAAATTCCCAAGCGCTCAATTGTAGAACTTCCTTCATCCTAAAAGAGAACACCAATATAGGTGAGGATCTTGCAAAGCCATCAACTGATAGTGATAGAGCAGATCAAGATGCTTCCCATATTAAAAATCCATCTCATGGAGACATTCCCATATTACAAGTTTCAACTTCAAGTGGCTTTGCATGGGCGAAAAGGCGTAAAGATGATACTTCTAGAAGATCTCATTGTCGATCTATTTCGAGGGGACATATTTCAAATTCTTCAGAACATTCTTCCTTAAATTATTCAAGAAACAACTTTGACTCAAGAAACCAGGAAAATAAGGAATTCTCCAACTCAAGGGGGCATTGTGACATACGTGAAATCTCTAAGCTTGCAATGTTGAACCAATGGGGCAAGTTTGATCGCCCTGACTCATTTGATGCTTCTGATGAATACCACTCACAAGAGCTATCTATAGCCCTTTATCGCAGAGAATATTCAGCATCCAGAAGAAGTAAAATGGATTCTGGAGAGAAGGTAGAATTTTCAGGACCCTTGCTATCTCAAATGCATGCTGTTGATGAGCTCTTAGAAAGACACGAGCGCCATATTCGCCGTACAGTTCGAAGATCTTGGTTTCAGAAAGGTAAGAAGTATGAGAAGAAATTAGAAGAATAA 2034 0.4282 MGCVNSRQTVSVTPAVDHSDLFQGNVSLGHSGRSLGEFNGSTKKKKTKKSESDRESSNFGCEESLSFRLGNLQKYVEGEQVAAGWPAWLTAVASEAIHGWVPLRADAFEKLEKIGQGTYSSVFRAKELETGKIVALKKVRFDIFEPESVRFMAREIMILRRLDHPNIVKLEGLITSKLSSNIYLVFEYMEHDITGLLSSPDVKFSESQIKCYMKQLLSGLDHCHSRGVMHRDIKGSNLLVNNEGILKVADFGLAKFSVSGNKQPLTSRVVTLWYRPPELLLGSTDYGPSVDLWSVGCVFAELLFRKPILQGRTEVEQLHKIFKLCGSPPDEYWKKTKLPHATLFKPQQTYNSCLQETFIDFPTATVNLLQTLLSIESYKRGTASSALSSEYFKTKPYACEPSSLPIYSPSKEIDAKHWEESRRKKIGGRARGPETRKSSRKPPGFSKLAPAESLVNQTRNSQALNCRTSFILKENTNIGEDLAKPSTDSDRADQDASHIKNPSHGDIPILQVSTSSGFAWAKRRKDDTSRRSHCRSISRGHISNSSEHSSLNYSRNNFDSRNQENKEFSNSRGHCDIREISKLAMLNQWGKFDRPDSFDASDEYHSQELSIALYRREYSASRRSKMDSGEKVEFSGPLLSQMHAVDELLERHERHIRRTVRRSWFQKGKKYEKKLEE 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0731 677 ProSitePatterns Serine/Threonine protein kinases active-site signature. 228 240 IPR008271 GO:0004672|GO:0006468
Mibi13g0731 677 FunFam probable serine/threonine-protein kinase At1g54610 191 431 - -
Mibi13g0731 677 SUPERFAMILY Protein kinase-like (PK-like) 101 397 IPR011009 -
Mibi13g0731 677 MobiDBLite consensus disorder prediction 417 456 - -
Mibi13g0731 677 Gene3D Transferase(Phosphotransferase) domain 1 191 430 - -
Mibi13g0731 677 MobiDBLite consensus disorder prediction 417 441 - -
Mibi13g0731 677 MobiDBLite consensus disorder prediction 521 572 - -
Mibi13g0731 677 MobiDBLite consensus disorder prediction 480 508 - -
Mibi13g0731 677 Gene3D Phosphorylase Kinase; domain 1 95 190 - -
Mibi13g0731 677 CDD STKc_CDK9_like 108 392 - -
Mibi13g0731 677 SMART serkin_6 108 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0731 677 MobiDBLite consensus disorder prediction 33 58 - -
Mibi13g0731 677 MobiDBLite consensus disorder prediction 538 559 - -
Mibi13g0731 677 PANTHER CELL DIVISION PROTEIN KINASE 106 396 - -
Mibi13g0731 677 ProSiteProfiles Protein kinase domain profile. 108 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0731 677 Pfam Protein kinase domain 108 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0731 677 MobiDBLite consensus disorder prediction 484 500 - -
Mibi13g0731 677 FunFam probable serine/threonine-protein kinase At1g54610 95 190 - -
Mibi13g0731 677 MobiDBLite consensus disorder prediction 39 58 - -
Mibi13g0731 677 ProSitePatterns Protein kinases ATP-binding region signature. 114 137 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0731 Mibi-ChrMibi13 9412043 9415856 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0731 100 424 Core Cell Cycle Gene Families AT5G10270 49.853 1.28e-108 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mibi13g0731 Pkinase 2.4e-68 CL0016