Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi13g0730 | ATGGCGCTGTTCAGAAGATTGTTTTACCGGAAGCCCCCAGATCGACTTTTGGAGATATCTGATAGAGTCTACGTTTTTGATTGCTGCTTTTCAACGGATGTGTTGGAAGATGATGAGTATAAAGATTATATGGGGGGAATTGTGGCTCAGCTACATGATCACTTTCCAGATGCTTCCTTCACTGCGTTTAACTTTAAAGAAGGAAAAGGGTTCAGTAGGATTTCAGACATACTAACAGAGTATGGCATGACTGTGATGGAATACCCTCAGGATTTTGAGAGGTGTCCACTTTTACCGTTAGAGGTGATTCATCACTTCCTTCGATCAAGTGAAAGCTGGTTATCTGTGGTTGGGCAAAGAAATGTGCTTTTGATGCATTGTGAAAAAGGAGGTTGGCCAGTACTTGCATTTATGCTAGCAAGTCTTCTTTTGTACAGAAAACAATACACTGGCGAGCAGAAGACTCTTGAAATGGTGTACAAGCAAGCTCCTAAAGAGATTCTTTATATTTTATCTCCTATAAACCCACAACCTTCTCAGTTGAGATATCTTCACTATATTTCCAGGAGAAATTTGGGTTTTATGTGGCCTCCTTTAGACACATCCTTGCATTTAGACTGTCTTATTCTCAGAGACCTTCCCTTATTTGATGATGGAAATGGCTGCCGCCCTCTTGTACGTGTGTATGGTCAGGATCCTACTTCTACACCTTCCAATGCAAATAGTTCTAAGCTTCTCTTTCCGACCAGCCTAAAGAACAAAAAATATGCTCGTCATTACCAACAGGCAGAATGTTTGCTGGTGAAATTAGACATCCATTGTCGTGTTCAAGGGGATATTGTTCTTGAGTGCATACATTTGCATGATGATCTCATTCGTGAGGAGATTATGTTTAGAGTTATGTTTCATACAGCATTTGTACGGTCAAATATTTTGACGCTCAATCGTGAAGAACTTGATATTATGTGGGATGCGAAGGATAATTTCCCTAAGGACTTTAAAGCAGAGGTGCTTTTTTTGGACGATGATTCTGTTATACCTGATATAACAATTGTTGATGATGATGATGATGATGATCCAAACGAGGCAGGGTATGCTTCACCTGAGGAATTCTATGAGGTGGAAGAGATCTTTACAAATGTTGTTGATTCACAAGAAGGTAAGGGGGAACATGATTCTCCTGCGGTTCATGACAATGCAGTTGATGATGATAGAAATCATAAAACGGTATGGAAAGAGAATTTGGATCCTCATACCTTTCAGGATTGTACATCAAATGATGGGATTCTTAAACAAGATGGAAGGACGGATTCTGTTATTCAAGCAGTGAAAGATATTGTTGTTGATGATGTGAAGTACAAGGTTGATGGGAGCTTGGATTCAGATCCTCATGTAGTGAAAGATATTGTTGTGGATGATGGAGAAATTAAGTCAACTTCTTTGGTGAATTCTACTGATATAATGCATAATGTTGAAGCAATGGAAGTTACTATGGATTTGCATGGACAATATGCAGATATGGGAGACAAACATGAGGAAGATGACCAAGCAATGGAAATAAAATTAGGTTCAAAGCCAGGACAACAGAAATCTGACCTAACCAGACAAAAAGCTGATAACTTAGCTCCACGTGCTGCAAGAAAACTACTACCAGGGAACTCAAGGCTATTGGGAAATACGTCGGCAGCAAAGCAAAAGACTAAATTACAAGAACAACATGGTGGACAAGCAAAACTAGCCAAACCAAATGCAATAACTAAGTGGATTCCCTCAAGCAAAAATTATAATGCAAATTCAATGCATGTCTTGTATCCAAAACTTAATATTGCTCTGGAAAATGCCAACTCTCGAAAGGAGAAAAGTGCAGATGCCAACATGAAAAATAAACACCAAATTCGGAAGCAAAGATCTTTGGACGGCACACATCACTCACCATCATACAAATTAAAGAATCATAAGCTGGGCCCTTCAAGATCTTCAGACCGTCTAGGAGACATTGACACAGAATGCTCATCATTTTCATTACCATCAATTGAAGAGACATATCTTCAATTAGCAACTCAAGCATTGGAAACGAACTCAAACCAAGCTCCAGAAATTCCTCCTCCCCCGCCTCCACCTCTACCTCCATTTCATGTTAAAAACTCTTCTTTACAAGATTTTGAATCCTTATCATTGCAAGAGGATACACCCCCTCCATCTGCTTTATTATATCCATCTTCCTCTTTGGTTGGAAATGCATCTATTCAGCCGCTTCCGCCACCAGCAAATCTATCATCATCAAGTGTACAGAACATTGAGATGGATGCATCACATGTAACTTCTTTTTGTCCGCCACCTCCACCCCCACCCCCACCTCCACCTCCATATCCATCTTTACCATCATTTACTAGGCAAATTGAAGGGGTTTCCTCATCTCTTCCATCTCTACAAGTGACTGATTATTCATCAGTTGTTGATGGAATGACTAGTGATGCCCTACCAACCTTGGTAGAAAGTGAAGCATTATCACCAAAATTTTCAACAATACAAGCTTTTTTGTCTCCACCTTCATATCATGTTAGTAATGCTCCATCACCATCTTCACCTCCACCTGCTTCAAGTAATGCCCTATCACCACCTCAACCTCCATTTTTGCCTCCATCTACTAAACAAGGTCTACATTTACCTCCACCTTCACCTCTTCTTAGTGGAAAAAGTCATCCTCTCCCTCAACCTCTTTCTATTAGAGAAGGCCCCCCTCCACTTCCACCTCTTCTTCCTTCAAGTAAACAAGGCTCTCATCCACCAGCACCTCCTCCTCCTCCTCCACCTCCCACTCACCCACATTTGCCTCCGCTAGCTAAACCAATCCCTCCTCTTCTAGGAAGACAAGGCCCCCCTCCACCTCCACCTCCTCCTCCTCCAGGAAGACAAGGCCCCCCTCCTCCTCCTCCTCCTCCAAGCAGGCATGTCCCCCCTCCACCACCTCCTCCTCCAGGAACACATTGCCCCCCTCCACCTCCACCTCTTCCTCCAGGCAGACAAGGCCCTCCACCGCCTCCACCTCCTCCAAGTGGACCAGGCCCTCCTCCACCTCTGCCTCCTTTAGGTGGGAAAGGCCAGCCTCCACCTCCGCCTCCGCCTCCTAATAGTAGACAAGGCCCACCCCCACCCCCACCTCCTGGAGAACGAGGTCTTGTTGCACCTGTTCCTCCTGGACCTCCAAGGGGTGCACCTCCACCACCCGGAGCTGGTCCAAGTGGGAGAGGACGTGGTCTCCCACGTCTTTCTGGATCAACTCCTCCCCGGCGATCCTCTTTAAAGCCTCTATATTGGGGTAAAGTGTCAAAGGCACTGCAAGGAAGTTTGTGGGACGAATTACAGAAACAATTTGATGTTTCAGAGATAGAGACCCTTTTCTCTGCAGTTGTTCCAAAAACTGCAGATAAGTCTATTGGGCGATGTATATCTGTTGGACATAAATCTGACAAAGTCCACTTGATTGAACTGAAGAGGGCCAATAATGTTGAAATTATGCTCACAAAGATTAAGATGCCACTTTCTGAAATGATGGCTGCAATTCTAAATTTGGATGATACAGTATTAGATGTTGATCAGGTTGAAAGTCTTTCTAAGTACTGTCCAACCAAAGAGGAGATGGAACTTTTGAAGGGATATACTGGTGACTATGAGAATTTGGGAAGGTGTGAACAGGTCTGATCTGCTGTTGGATTCAAGCTGGATAGTCTTTTAAAGCTCTCTGAGACTCGTGCTTCTACTGGTAGGATGACACTAATGCATTATCTATGTAAGGTCTTAGCTGAAAAGTCTCCTTCACTCCTTGATTTTCACTTGGACCTTGTTAGCTTGGAAGTTGCTAGTAAGATACAATTAAAAGCATTAGCAGAAGAGATGGCATCAATTAATATAGGATTAAGAAAAGTTAAACAGGAGCTTGCTGCATCTGAAAACGATGGTCCTTCATCTGAAAGTTTCCGTAAGACGCTAAAAGATTTTATTGAAGATGATCTTGCAAGATATTTCAATGAGGACCCTGCTCGTTACCCGTTTGAACAAGTAACTGCTACTCTATGGAATTTCACACGAATGTTTCGGAAAGCGCACGATGAGAACATAAAACAAGCAGAGTCGGAGAAGAAGAAGGCTGAGAAGGAGGCTGAAGAGAAGGCTAAGGCGGCTGCTGCAACATCATCATCATCAACATCTAAAAAACAAGTTTTGTAG | 4227 | 0.4287 | MALFRRLFYRKPPDRLLEISDRVYVFDCCFSTDVLEDDEYKDYMGGIVAQLHDHFPDASFTAFNFKEGKGFSRISDILTEYGMTVMEYPQDFERCPLLPLEVIHHFLRSSESWLSVVGQRNVLLMHCEKGGWPVLAFMLASLLLYRKQYTGEQKTLEMVYKQAPKEILYILSPINPQPSQLRYLHYISRRNLGFMWPPLDTSLHLDCLILRDLPLFDDGNGCRPLVRVYGQDPTSTPSNANSSKLLFPTSLKNKKYARHYQQAECLLVKLDIHCRVQGDIVLECIHLHDDLIREEIMFRVMFHTAFVRSNILTLNREELDIMWDAKDNFPKDFKAEVLFLDDDSVIPDITIVDDDDDDDPNEAGYASPEEFYEVEEIFTNVVDSQEGKGEHDSPAVHDNAVDDDRNHKTVWKENLDPHTFQDCTSNDGILKQDGRTDSVIQAVKDIVVDDVKYKVDGSLDSDPHVVKDIVVDDGEIKSTSLVNSTDIMHNVEAMEVTMDLHGQYADMGDKHEEDDQAMEIKLGSKPGQQKSDLTRQKADNLAPRAARKLLPGNSRLLGNTSAAKQKTKLQEQHGGQAKLAKPNAITKWIPSSKNYNANSMHVLYPKLNIALENANSRKEKSADANMKNKHQIRKQRSLDGTHHSPSYKLKNHKLGPSRSSDRLGDIDTECSSFSLPSIEETYLQLATQALETNSNQAPEIPPPPPPPLPPFHVKNSSLQDFESLSLQEDTPPPSALLYPSSSLVGNASIQPLPPPANLSSSSVQNIEMDASHVTSFCPPPPPPPPPPPPYPSLPSFTRQIEGVSSSLPSLQVTDYSSVVDGMTSDALPTLVESEALSPKFSTIQAFLSPPSYHVSNAPSPSSPPPASSNALSPPQPPFLPPSTKQGLHLPPPSPLLSGKSHPLPQPLSIREGPPPLPPLLPSSKQGSHPPAPPPPPPPPTHPHLPPLAKPIPPLLGRQGPPPPPPPPPPGRQGPPPPPPPPSRHVPPPPPPPPGTHCPPPPPPLPPGRQGPPPPPPPPSGPGPPPPLPPLGGKGQPPPPPPPPNSRQGPPPPPPPGERGLVAPVPPGPPRGAPPPPGAGPSGRGRGLPRLSGSTPPRRSSLKPLYWGKVSKALQGSLWDELQKQFDVSEIETLFSAVVPKTADKSIGRCISVGHKSDKVHLIELKRANNVEIMLTKIKMPLSEMMAAILNLDDTVLDVDQVESLSKYCPTKEEMELLKGYTGDYENLGRCEQVXSAVGFKLDSLLKLSETRASTGRMTLMHYLCKVLAEKSPSLLDFHLDLVSLEVASKIQLKALAEEMASINIGLRKVKQELAASENDGPSSESFRKTLKDFIEDDLARYFNEDPARYPFEQVTATLWNFTRMFRKAHDENIKQAESEKKKAEKEAEEKAKAAAATSSSSTSKKQVL | 1408 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi13g0730 | 1408 | ProSiteProfiles | C2 tensin-type domain profile. | 200 | 342 | IPR014020 | - | |
| Mibi13g0730 | 1408 | MobiDBLite | consensus disorder prediction | 1370 | 1408 | - | - | |
| Mibi13g0730 | 1408 | Pfam | Formin Homology 2 Domain | 1093 | 1232 | IPR015425 | - | |
| Mibi13g0730 | 1408 | Pfam | Formin Homology 2 Domain | 1235 | 1336 | IPR015425 | - | |
| Mibi13g0730 | 1408 | MobiDBLite | consensus disorder prediction | 616 | 646 | - | - | |
| Mibi13g0730 | 1408 | MobiDBLite | consensus disorder prediction | 684 | 739 | - | - | |
| Mibi13g0730 | 1408 | PANTHER | FORMIN-J | 1 | 792 | - | - | |
| Mibi13g0730 | 1408 | MobiDBLite | consensus disorder prediction | 510 | 578 | - | - | |
| Mibi13g0730 | 1408 | MobiDBLite | consensus disorder prediction | 856 | 888 | - | - | |
| Mibi13g0730 | 1408 | MobiDBLite | consensus disorder prediction | 907 | 1081 | - | - | |
| Mibi13g0730 | 1408 | Gene3D | - | 200 | 344 | - | - | |
| Mibi13g0730 | 1408 | MobiDBLite | consensus disorder prediction | 753 | 828 | - | - | |
| Mibi13g0730 | 1408 | MobiDBLite | consensus disorder prediction | 847 | 1102 | - | - | |
| Mibi13g0730 | 1408 | Coils | Coil | 1366 | 1393 | - | - | |
| Mibi13g0730 | 1408 | MobiDBLite | consensus disorder prediction | 382 | 407 | - | - | |
| Mibi13g0730 | 1408 | Pfam | C2 domain of PTEN tumour-suppressor protein | 201 | 339 | IPR014020 | - | |
| Mibi13g0730 | 1408 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 13 | 188 | IPR029021 | - | |
| Mibi13g0730 | 1408 | MobiDBLite | consensus disorder prediction | 775 | 794 | - | - | |
| Mibi13g0730 | 1408 | SMART | PTEN_C2_2 | 198 | 341 | IPR014020 | - | |
| Mibi13g0730 | 1408 | MobiDBLite | consensus disorder prediction | 697 | 712 | - | - | |
| Mibi13g0730 | 1408 | MobiDBLite | consensus disorder prediction | 615 | 668 | - | - | |
| Mibi13g0730 | 1408 | MobiDBLite | consensus disorder prediction | 554 | 572 | - | - | |
| Mibi13g0730 | 1408 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 1157 | 1390 | - | - | |
| Mibi13g0730 | 1408 | Coils | Coil | 1292 | 1312 | - | - | |
| Mibi13g0730 | 1408 | MobiDBLite | consensus disorder prediction | 797 | 823 | - | - | |
| Mibi13g0730 | 1408 | Gene3D | Formin, FH2 domain | 1092 | 1234 | IPR042201 | - | |
| Mibi13g0730 | 1408 | MobiDBLite | consensus disorder prediction | 716 | 739 | - | - | |
| Mibi13g0730 | 1408 | Gene3D | Protein tyrosine phosphatase superfamily | 14 | 199 | IPR029021 | - | |
| Mibi13g0730 | 1408 | SMART | it6_source | 698 | 1406 | IPR015425 | - | |
| Mibi13g0730 | 1408 | MobiDBLite | consensus disorder prediction | 1394 | 1408 | - | - | |
| Mibi13g0730 | 1408 | MobiDBLite | consensus disorder prediction | 753 | 771 | - | - | |
| Mibi13g0730 | 1408 | Gene3D | Formin, FH2 domain | 1235 | 1406 | IPR042201 | - | |
| Mibi13g0730 | 1408 | MobiDBLite | consensus disorder prediction | 1370 | 1392 | - | - | |
| Mibi13g0730 | 1408 | MobiDBLite | consensus disorder prediction | 385 | 407 | - | - | |
| Mibi13g0730 | 1408 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 203 | 339 | IPR035892 | - | |
| Mibi13g0730 | 1408 | ProSiteProfiles | Formin homology-2 (FH2) domain profile. | 1091 | 1408 | IPR015425 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mibi13g0730 | Mibi-ChrMibi13 | 9402182 | 9409983 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mibi13g0730 | 1 | 605 | FH2 protein (formin) Gene Family | AT5G07740 | 57.756 | 0.0 | 688 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Mibi13g0730 | 13 | 9402182 | 9409983 | Mibi13g0730 | 13 | 9402182 | 9409983 | ECH |