Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0724 ATGGAGACTGAGGAGATTAATTTGAACAAAGAGTCTGTTGTTGTTGCTGGAAGCAATAGTAAGGGTGGTGATGGATTCATTGATAGAAGCAAAGTCAGGATTTTGTTATGTGACAGTGATGCCAAGAGTTCGGAAGAGGTGTTCACGCTTCTCTTGAAGTGCTCTTATCAGGTCACTTCAGTGAGGTCAGCAAGACAGGTAATTGATGCATTGAACGCAGAAGGGCAAGATATTGATATCATACTTGCTGAAGTTGACCTCCCTATGAAGAAGGGTATGAAGATGTTGAAGTACCTTGCAAGAGACAAGGAACTGCGCCGAATCCCTGTTATAATGATGTCGGCACAAGACGAGGTATCCGTTGTTGTTAAGTGCTTAAAACTCGGAGCAGCTGACTATCTAGTAAAGCCTTTACGGACTAATGAACTATTAAATTTGTGGACACACATGTGGAGAAGGAGGCGCATGCTCGGACTGGTAGAGAAGAACATCTTGAACTATGAGTTTGATCTGGTTGTATCAGATCCTAGTGATGCTAATACGAACAGTACCACCTTGTTCTCAGATGATACAGATGACAGGTCCAAGAGAAGCACTAATCCTGAGGCTGGAATGCCTATCCAGCAGGAACATGAGTCGACTGTTGCTGTTGCCTCTGCTGTTGTAGTTTTTGAGGAGCTTCCAAATGTTCGAGCATCAGAATATCGCCCTGAAGTGCCTGGAATTAGTGATCGCCGAACTGGACATTTTTCGGCTGGTCCCAAAAAGAGTGAACTTAAGATTGGGGAGTCATCAGCCTTCTTCACTTATGTCAAAGCTGCCACAATGAAGAGCAATTTCCAACCAGTCATTCATGTTGATCATAATGCTGCTACTCATGTGGGGATGGAAGATACACATCAATCTTGCACTCAACAAGGGGTTAATGATCTTCAAATGCATGAAAATGGAGAGACATGGGAAAGCCATTCACAGGATGACTTGCCCAGCAGTAATAGCATCCCGGATTCTTTCTCCATTGAAAGGTCTTCTACTCCTGCATCAATGGAAACTCCACAGCAAAAACACTCCATGGAAGAAACTTTACCTCAAGGTATGATCTATCCAAGAAGTGGAACTCATAATTCTGAATTTGAAGTATCCGGCAGCATGCCCGGCCAACATCATTATCCATATTATATGCCAGGGGTTGTTAATCCCATTATGATGCCATCATCAGCACAATTGTACCAAAAGAATCTCCAGGACATGCAGGCCCATGCTGGTACAGCTATCATTGCACAATACAATCATCTTTCACAATGCCCTCCTCATACATCGGGTATGACCTCCTTCCCATATTACCCGATGGGTTTGTGTTTACAGCCTGGACAGATGTCTTCTGTTCATTCATGGCCATCATTTGGTAATTCAACTTCATCTGAAGTCAAAATGAGTAAAGTTGATAGAAGAGAAGCAGCACTGATGAAGTTTAGGCAGAAAAGGAAAGAGCGCTGCTTTGATAAGAAAATTAGGTATGTCAATAGGAAACGACTTGCTGAAAGACGGCCACGGGTGAGAGGACAGTTTGTTAGAAAGTTGAACGGTGTAAATGTAGATCTTAATGGCCAACCTGCTTCCACTGACTACGATGAGGATGATGAAGAAGATGAAGAGGATAACGCAGTGCAAGATTCCTCTCCTGAGGATACTTAA 1695 0.4319 METEEINLNKESVVVAGSNSKGGDGFIDRSKVRILLCDSDAKSSEEVFTLLLKCSYQVTSVRSARQVIDALNAEGQDIDIILAEVDLPMKKGMKMLKYLARDKELRRIPVIMMSAQDEVSVVVKCLKLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLVEKNILNYEFDLVVSDPSDANTNSTTLFSDDTDDRSKRSTNPEAGMPIQQEHESTVAVASAVVVFEELPNVRASEYRPEVPGISDRRTGHFSAGPKKSELKIGESSAFFTYVKAATMKSNFQPVIHVDHNAATHVGMEDTHQSCTQQGVNDLQMHENGETWESHSQDDLPSSNSIPDSFSIERSSTPASMETPQQKHSMEETLPQGMIYPRSGTHNSEFEVSGSMPGQHHYPYYMPGVVNPIMMPSSAQLYQKNLQDMQAHAGTAIIAQYNHLSQCPPHTSGMTSFPYYPMGLCLQPGQMSSVHSWPSFGNSTSSEVKMSKVDRREAALMKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKLNGVNVDLNGQPASTDYDEDDEEDEEDNAVQDSSPEDT 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0724 564 ProSiteProfiles CCT domain profile. 484 526 IPR010402 GO:0005515
Mibi13g0724 564 Pfam Response regulator receiver domain 34 145 IPR001789 GO:0000160
Mibi13g0724 564 SMART REC_2 32 147 IPR001789 GO:0000160
Mibi13g0724 564 ProSiteProfiles Response regulatory domain profile. 33 151 IPR001789 GO:0000160
Mibi13g0724 564 PANTHER TWO-COMPONENT RESPONSE REGULATOR 32 232 IPR045279 GO:0009736
Mibi13g0724 564 SUPERFAMILY CheY-like 29 158 IPR011006 -
Mibi13g0724 564 Gene3D - 32 227 - -
Mibi13g0724 564 MobiDBLite consensus disorder prediction 180 212 - -
Mibi13g0724 564 MobiDBLite consensus disorder prediction 530 564 - -
Mibi13g0724 564 Pfam CCT motif 484 526 IPR010402 GO:0005515
Mibi13g0724 564 MobiDBLite consensus disorder prediction 317 358 - -
Mibi13g0724 564 MobiDBLite consensus disorder prediction 540 564 - -
Mibi13g0724 564 MobiDBLite consensus disorder prediction 323 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0724 Mibi-ChrMibi13 9365506 9369814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0724 21 563 Response Regulator Gene Family AT5G61380 51.118 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Mibi13g0724 Response_reg 2.9e-17 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi13g0724 13 9365506 9369814 Mibi13g0724 13 9365506 9369814 ECH