Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0719 ATGATCTTCGTCCTTATCTCCCCACTTTCTCTGGGTTTTCGCTTAAACCTCTCCACCATATTCCCTCTTGAGAAATTTTGGGTTTTGAATAGCCCAGAAATGGAAAACGTTGTGGTGGGACTCTATAAGGAAGAAGAGAAGATGAATCTGCCTCCTGGGTTTCGGTTTCATCCCACTGATGAAGAGCTTATAAGTCATTATCTGTACAAGAAGGTCACTGATCAAAACTTCTCAGCTAGGGCCATTGGGGAAGTGGATTTGAATAGGTCTGAGCCTTGGGATCTGCCATATAAAGCAAAAATGGGAGAAAAAGAGTGGTACTTTTTCTGTGTGAGGGACAGAAAATACCCAACTGGTTTGAGAACCAATAGGGCCACTGAAACAGGATACTGGAAAGCCACAGGGAAAGATAAAGAGATTTACAGAGGAAAATCTCTAGTAGGTATGAAGAAAACTCTGGTTTTCTACAGAGGAAGAGCCCCCAAAGGAGAAAAAACCAATTGGGTCATGCACGAATACAGATTAGAGGGTAAATTCTCTGTCCACAACCTCCCTAAAACCGCCAAGAATGAGTGGGTGATTTGCAGGGTTTTTCAAAAAGGTTCAAGTGGAAAGAAAACCCATATTTCAGGGATGATGAGGCTGGATTCTCTGGGAAATGAATTGGCTTCTTCTGGTTTACCTCCATTAACGGATTCGTCACCTTTCCCTGGCAATAAAACCAAACATGTCACTGAATCGGCTTACGTGCCCTGCTTCTCCAATCCAATTGATACTCAAACTCACAGGAACATCCATCAAGGTGGGATCTTTGATTCCTACACCAACTTCCCTAATTATGGTGTTTCCTCAAATCCCTCATCGGACACTAATCTTCCAAGAATCCCACTTTCTGGTTCCTTATATTCTTCCTCTCAACCACATCAGCAAGCTCCTTCAAGTTTAGCTTTACCCAGTTCTATTTATGGCCTTCAAGACCAGACTCTGCTTAGAGCTTTGCTTGAAAACCAAGAATCAAACAGGAACAATTTCAAACCGGAGAGGGACATGATCAGTGTGTCGCAAGAAACAGGTCTTACTACCGACATGAACCCAGAAATCTCCTCGGTTGTGTCGAATCTTGAAATGACTCGAAGAGCCTTCGACAATCATCATCATCATCATCATCAGCAACAACATCAACAACCAACTGCTTCATCTGCAGCAATGGATCACTATGAAGGTTTGTGGACTTACTGA 1239 0.4286 MIFVLISPLSLGFRLNLSTIFPLEKFWVLNSPEMENVVVGLYKEEEKMNLPPGFRFHPTDEELISHYLYKKVTDQNFSARAIGEVDLNRSEPWDLPYKAKMGEKEWYFFCVRDRKYPTGLRTNRATETGYWKATGKDKEIYRGKSLVGMKKTLVFYRGRAPKGEKTNWVMHEYRLEGKFSVHNLPKTAKNEWVICRVFQKGSSGKKTHISGMMRLDSLGNELASSGLPPLTDSSPFPGNKTKHVTESAYVPCFSNPIDTQTHRNIHQGGIFDSYTNFPNYGVSSNPSSDTNLPRIPLSGSLYSSSQPHQQAPSSLALPSSIYGLQDQTLLRALLENQESNRNNFKPERDMISVSQETGLTTDMNPEISSVVSNLEMTRRAFDNHHHHHHQQQHQQPTASSAAMDHYEGLWTY 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0719 412 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 47 352 - -
Mibi13g0719 412 MobiDBLite consensus disorder prediction 282 314 - -
Mibi13g0719 412 SUPERFAMILY NAC domain 46 200 IPR036093 GO:0003677|GO:0006355
Mibi13g0719 412 Gene3D NAC domain 59 204 IPR036093 GO:0003677|GO:0006355
Mibi13g0719 412 Pfam No apical meristem (NAM) protein 51 175 IPR003441 GO:0003677|GO:0006355
Mibi13g0719 412 FunFam NAC domain-containing protein 100-like 59 204 - -
Mibi13g0719 412 ProSiteProfiles NAC domain profile. 50 200 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0719 Mibi-ChrMibi13 9312934 9314512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0719 48 412 NAC Transcription Factor Family AT5G07680 57.493 4.12e-129 373
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi13g0719 NAM 5.6e-40 No_clan