Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0710 ATGATGATGATGGGGAATCAGAATGAGGCACTCGTGGGAGGGAACCTTAAGAACGAATTAGTTCCATTCCCTATCACGTACCAGTTTCCTACACCTGACTTGAGGGGAAATGGCTATGGATATTTAGGATTGGATTGGGCTGATGAGTTAGCCTTCCCTTGGTATATTATGGAACCCGATGCTCTGTATGAAACCCTGGCCATTGAACCCACACCAAGTGTGCAAGACTATGAGTTTTATGACATTAAGAAGGGACTGGGACTGTGGAATGAGATTTATGATGGGTTTGATTCAGATAAGGCTGTTTATGTAGAAAGTGGGAAGGAAGTGAAAGAGCAAGAGAGAGGGGTGAAACGAGAAGAGACAAGTGGAAGCACAAAGTTGTTGTCAAGGAAAACTATTTCACAGTACTTTTATATGCCAATCACACAGGCTGCCAAGGAGCTTAATGTGGGTCTCACACTCCTGAAGAAAAGGTGCAGAGAATTGGGAATCAGAAGGTGGCCACATAGGAAACTCATGAGCCTTCAAACCTTGATGAACAACGTAAAGGAGCTAGGGAAAGAGGGGGGCCAGGAAAGTGAAGAGAAGCTGAGGGACGCGCTTGAGATATTGGCAAAGGAAAAGAAGATGATGGAGGAGATGCCAGATTTGCAGCTTGAGGTTAACACAAAGAGGCTTAGACAAGCTTGCTTCAAAGCCAACTACAAGAAAAGGAAGCTCATGGTGTCTTCCATGGAATCTGAGTGTACCAAGAATGAATATGATAATTATGAGGATTAA 783 0.4393 MMMMGNQNEALVGGNLKNELVPFPITYQFPTPDLRGNGYGYLGLDWADELAFPWYIMEPDALYETLAIEPTPSVQDYEFYDIKKGLGLWNEIYDGFDSDKAVYVESGKEVKEQERGVKREETSGSTKLLSRKTISQYFYMPITQAAKELNVGLTLLKKRCRELGIRRWPHRKLMSLQTLMNNVKELGKEGGQESEEKLRDALEILAKEKKMMEEMPDLQLEVNTKRLRQACFKANYKKRKLMVSSMESECTKNEYDNYED 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0710 260 Coils Coil 195 215 - -
Mibi13g0710 260 Pfam RWP-RK domain 129 176 IPR003035 -
Mibi13g0710 260 PANTHER PROTEIN RKD4 121 249 IPR044607 GO:0003700
Mibi13g0710 260 ProSiteProfiles RWP-RK domain profile. 112 196 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0710 Mibi-ChrMibi13 9221209 9222270 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0710 119 240 AtRKD Transcription Factor Family AT1G18790 69.600 5.65e-55 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Mibi13g0710 RWP-RK 1.8e-21 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi13g0710 13 9221209 9222270 Mibi13g0710 13 9221209 9222270 ECH