Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0703 ATGGAAGGAAGCAGCAGTGAAGATCTCCACCACCACCATAACCACCACCAAAACCACCGCCCCAACTTCCCATTCCAACTCCTAGAAAAAAAAGAACACCAACACCACCATCACCATCAACAACAAGACCCACCTTCCTGTTCAACTTCTTCCCCATACCCTTCTCTAGCCATCTCCCCAGTAGAACCCTCCTCCTCCTCCTCCGCCGCCGCAGCCGCCATTAATAATTCCAACCGATCCAACAACCTCGTCCTCCCAACATCTTCATCTTCAGTAGTCGAACCCTCCAACAACAATAATAATAATAATAAAAAGCCACCCCCTAAACGAACCTCCACCAAGGACCGCCACACCAAGGTCGACGGCCGCGGCCGCCGCATCCGAATGCCCGCCCTCTGCGCCGCCCGCGTCTTCCAGCTCACCCGCGAGCTCGGCCACAAATCCGACGGCGAGACCATCGAGTGGCTCCTCCAACAGGCCGAGCCCGCCGTCATCGCCGCCACCGGCACCGGCACCATCCCCGCCAACTTCACCTCCCTCAACATCTCCCTAAGAAGCTCCGGCTCCACCATGTCCGTACCCTCCCAGCTCAGATCCTCCTACTTCAACCCCAACTTCTCCCTCCAAAATCGCCGTCCCTTCTTCCCCGGCGGCATCGGCCTCAACCCCGACGGCGCCGGAAACAACAACCCCACCTCAACCCTACTGAATTTCCAGTCCAACACTTTCTCCGGCGCCGGGAACATGTTACAGGCGAAGCAGGAATTGCGCGGCGGCGACGGCGGCGGCGGGGTGCCGACGTCGTCGACGTTGGATTTGGCGGAGGCGGAGGAGGGGATGGCGGCGAGGAAGAGAAGGGCGGCGGGGGAGCAAGAATTGTCGCCGTCGTCGTCGTCGGCGCAGCAGTATCAGATGGGTAGTTATTTGTTACAGCCAAGCTCAGGAGGGATAGCGGGGAGTGGAGGGAACATATGGATGGTGGCGAATTCTAGTAATCAGGTGATGAGTGGGGATCCTGTGTGGACGTTTCCATCAGTGAATAATAGCGCTTTGTATAGAGGCGCTACTATGTCTAGTGGGTTACATTTCATGAATTTCCCTACCCCTATGGCCCTATTGCCTAGTCAGCAATTAGGGTCGTCTGGAATTGGTGGTGGTGGTGGTATGGCTGAGGGCCATTTGGGTATGCTCGCCGGAATCAACCCGTACCGGACGGTGAGCGGCGTGTCGGAGTCGCAGGCCAGTGGGTCCCAATCACATCATGGTGGTGGTGGTGGTGGTGATGATCGGCATGACACAAATAGCCACAGGTCATAG 1317 0.5748 MEGSSSEDLHHHHNHHQNHRPNFPFQLLEKKEHQHHHHHQQQDPPSCSTSSPYPSLAISPVEPSSSSSAAAAAINNSNRSNNLVLPTSSSSVVEPSNNNNNNNKKPPPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSTMSVPSQLRSSYFNPNFSLQNRRPFFPGGIGLNPDGAGNNNPTSTLLNFQSNTFSGAGNMLQAKQELRGGDGGGGVPTSSTLDLAEAEEGMAARKRRAAGEQELSPSSSSAQQYQMGSYLLQPSSGGIAGSGGNIWMVANSSNQVMSGDPVWTFPSVNNSALYRGATMSSGLHFMNFPTPMALLPSQQLGSSGIGGGGGMAEGHLGMLAGINPYRTVSGVSESQASGSQSHHGGGGGGDDRHDTNSHRS 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0703 438 MobiDBLite consensus disorder prediction 276 300 - -
Mibi13g0703 438 Pfam TCP family transcription factor 111 227 IPR017887 -
Mibi13g0703 438 MobiDBLite consensus disorder prediction 424 438 - -
Mibi13g0703 438 ProSiteProfiles TCP domain profile. 113 167 IPR017887 -
Mibi13g0703 438 MobiDBLite consensus disorder prediction 25 42 - -
Mibi13g0703 438 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 32 423 IPR005333 GO:0003700
Mibi13g0703 438 MobiDBLite consensus disorder prediction 408 438 - -
Mibi13g0703 438 MobiDBLite consensus disorder prediction 43 64 - -
Mibi13g0703 438 MobiDBLite consensus disorder prediction 1 64 - -
Mibi13g0703 438 MobiDBLite consensus disorder prediction 80 124 - -
Mibi13g0703 438 MobiDBLite consensus disorder prediction 80 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0703 Mibi-ChrMibi13 9096287 9097603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0703 104 432 TCP Transcription Factor Family AT3G47620 44.313 1.34e-66 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mibi13g0703 TCP 8.4e-38 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi13g0703 13 9096287 9097603 Mibi13g0703 13 9096287 9097603 ECH