Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0698 ATGTCTGGCCAAAAAAGTTGCAGAGCTTTAAACTTCAACGAGAATGACATTAATGATCTTGTGTCGAGGTTACAAGCACTTCTTCCTCGCCTGGACCGAAGGGCCAACTCAAGGGTATCGGTGTCGAAGATCTTGAAAGAAACTTGTAGTCACATCAAGAAGCTACAGAAAGAGGTGGAAGAGCTAAGTGAAAGGGTAATAGAGCTGATGGATTCTGCTGACATTAGGGATATAGACGAGGAGAGTCTTAGAAGATTATTTCTACATTGA 270 0.4222 MSGQKSCRALNFNENDINDLVSRLQALLPRLDRRANSRVSVSKILKETCSHIKKLQKEVEELSERVIELMDSADIRDIDEESLRRLFLH 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0698 89 Pfam Helix-loop-helix DNA-binding domain 16 56 IPR011598 GO:0046983
Mibi13g0698 89 PANTHER DNA BINDING PROTEIN 8 87 IPR044172 -
Mibi13g0698 89 Coils Coil 45 72 - -
Mibi13g0698 89 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 15 69 IPR036638 GO:0046983
Mibi13g0698 89 Gene3D - 14 84 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0698 Mibi-ChrMibi13 9066150 9067048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0698 12 74 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47710 48.438 3.13e-14 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi13g0698 HLH 7.6e-06 No_clan