Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0687 ATGGAGTTTTCTCAGCGCAGATCTGGTGGCCAAGAAGAAGGTGGACCAGTCAAAGAAGAGAAGACAAGTGAATCTACTGCTCCTGCACATAATCATGATGAAGCTTCTCCTCATCTTAAGATAGATAGTTCTATTGTCCAGGTGCCAGCCATGAATACTACTGATAGATCCGTCGTGGACACTGGACCACCTCAAGCATCTTCAGCCAAAAAGGAAGAGGTTGATGAACTAGAATCAGCAAGAGTTGAAATGGGAGAGGTGAGACAAGAAAACCAAAGGCTAAAGATGTGTTTGGAGAGAATAATGAAGGAATACCAGGCTTTGCAAATGCAATTCCACGTTATAGCTCAACAAGAAGAAGCAGCCACCACCAAAAATGAAGAGCCAGCTCTCGAGGAATCCGACCTGATGGTCTCACTCAGTCTTGGAAGAGCTCCAAAATCTGACGAAAAATCTAAAGTCATAAACCCCAAACCATCATCATCTCATTTACACAGGCAACAAGAAGAAGAAGGAGAAGGGGAGCTGAAAAAAGAGCTGGCTCTTGGACTGGATTGCAAATTTGAGACATCAAAATCTGGAAGCACCACTGAAGCTTTACCAAATAATGGAAGCCCCACTAATAGTTCTGAATTAGTGCACAAGGAGGAGGAAGCTGGAGAGAGTTGGCCACCAAGTAAGGCACTTAACAATAAAACTCCCAGAGATTCCACCGATCAAGATGAAGTTTCCCAGCAAAATCCTGCTAAGAAGGCCAGAGTTTGTGTCAGAGCAAGATGTGACACCCCTACTTTGAATGATGGATGCCAATGGAGGAAATATGGACAAAAAATATCCAAGGGAAATCCTTGTCCAAGAGCTTATTATCGTTGCACAGTTGCACCTAATTGTCCTGTACGAAAGCAGGTGCAAAGATGTGCAGAGGACATGTCGGTTCTAATAACCACATATGAAGGAAACCACAACCACCCTCTTCCTCTCTCTGCCACAGCCATGGCCTCCACGACTTCTGCAGCTGCTTCCATGCTCTTGTCTGGTTCATCTTCTTCATCCTCCAATCCCTCTGGCTTACTGATGCCTTGTTCTTCAACAACAGCACCCACCATTGGCTCTGACCTCCATGGCATCAACTTCTACCTCTCAGATCCCTCCAAACCAAAGCAATTCTACCTCTCCAATCCTGCTCTTTCTCCCTCACCATCACACCCAACCATCACCCTCGACCTCACTTCCAACAATTATCATAATCATAACAACAATAACAATCCTTCCTCTTCAAACTATTTCTCCTCCCACTTCAACAGATTCAACCCACCCAGATTCCCTTCTTCATCAACCAGCCTCAGCTTCGGTTCCTCAGACTCCAATAATAATGCAATTCCATGGAGCAACAGCAACAACAACAATGTAGGCTTCCTCGGTTACAACTACAACACACAACCATATAATAACAGTAGGAACATCCTTAGTAGCATCAACCTCGGAAGACAACTACCTATTCAACCTCATCCTCCTACTCCTCAAGTGCATCATCAAAATAATCCTTCACTTCCAGACACCATAGCTGCAGCAACTAAAGTGATAACAGCTGATCCATCCTTTCAGTCAGCTTTGGCTGCTGCACTTACCTCCATTATTGGCACTGGAAATAATAGTGCTAGTAGCATTGTTAGTGGGAATAATAGCGCTCAAGGTGTTGGAGAAATTAATAACTTGGGTCATCATCAGAAAATTAACTTGTGGGGAGATATTATTAATGCAGCTTCTGCTTCTGGTTCAACTTCTTCTAATAAAGTTAGTGGATGTGGTTCTAGCTTCTTGAGTAAAACGACGCCGTCTGGAACACAAGCTGCTTCTGGAAGTAGTACTGGTTTGATGTTTCTACCTCCTTCTTTGCCGTTTTCTACATCCAAGACCGCTTCTGCTTTGTCTCCGGCTGATAATAGAGACAAGTCAAATTCTTGA 1965 0.4392 MEFSQRRSGGQEEGGPVKEEKTSESTAPAHNHDEASPHLKIDSSIVQVPAMNTTDRSVVDTGPPQASSAKKEEVDELESARVEMGEVRQENQRLKMCLERIMKEYQALQMQFHVIAQQEEAATTKNEEPALEESDLMVSLSLGRAPKSDEKSKVINPKPSSSHLHRQQEEEGEGELKKELALGLDCKFETSKSGSTTEALPNNGSPTNSSELVHKEEEAGESWPPSKALNNKTPRDSTDQDEVSQQNPAKKARVCVRARCDTPTLNDGCQWRKYGQKISKGNPCPRAYYRCTVAPNCPVRKQVQRCAEDMSVLITTYEGNHNHPLPLSATAMASTTSAAASMLLSGSSSSSSNPSGLLMPCSSTTAPTIGSDLHGINFYLSDPSKPKQFYLSNPALSPSPSHPTITLDLTSNNYHNHNNNNNPSSSNYFSSHFNRFNPPRFPSSSTSLSFGSSDSNNNAIPWSNSNNNNVGFLGYNYNTQPYNNSRNILSSINLGRQLPIQPHPPTPQVHHQNNPSLPDTIAAATKVITADPSFQSALAAALTSIIGTGNNSASSIVSGNNSAQGVGEINNLGHHQKINLWGDIINAASASGSTSSNKVSGCGSSFLSKTTPSGTQAASGSSTGLMFLPPSLPFSTSKTASALSPADNRDKSNS 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0687 654 SUPERFAMILY WRKY DNA-binding domain 258 326 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi13g0687 654 ProSiteProfiles WRKY domain profile. 260 326 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi13g0687 654 SMART WRKY_cls 265 325 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi13g0687 654 CDD bZIP 70 104 - -
Mibi13g0687 654 MobiDBLite consensus disorder prediction 1 89 - -
Mibi13g0687 654 Gene3D WRKY domain 249 327 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi13g0687 654 MobiDBLite consensus disorder prediction 163 177 - -
Mibi13g0687 654 Coils Coil 70 111 - -
Mibi13g0687 654 Pfam WRKY DNA -binding domain 266 324 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi13g0687 654 MobiDBLite consensus disorder prediction 191 210 - -
Mibi13g0687 654 MobiDBLite consensus disorder prediction 46 64 - -
Mibi13g0687 654 FunFam probable WRKY transcription factor 31 250 327 - -
Mibi13g0687 654 MobiDBLite consensus disorder prediction 120 177 - -
Mibi13g0687 654 MobiDBLite consensus disorder prediction 634 654 - -
Mibi13g0687 654 MobiDBLite consensus disorder prediction 191 252 - -
Mibi13g0687 654 MobiDBLite consensus disorder prediction 69 89 - -
Mibi13g0687 654 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 58 554 IPR044810 GO:0003700
Mibi13g0687 654 MobiDBLite consensus disorder prediction 12 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0687 Mibi-ChrMibi13 8981404 8985800 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0687 84 548 WRKY Transcription Factor Family AT5G15130 41.719 2.98e-83 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mibi13g0687 WRKY 6.3e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g0167 09 2183902 2187705 Mibi13g0687 13 8981404 8985800 ECH
Mibi13g0687 13 8981404 8985800 Mibi13g0687 13 8981404 8985800 ECH