Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0672 ATGGGGGAGAAGTCTGAAGTATTGGAGGCTGTGTTGAAGGAAGCTGTGGATTTGGTAACAGATCTGTATAACTTGAAGCTTCTTGAAAACATACCCATTGAGGAAGTTTTTGAGAATCTAAGATGTAGCAGAGAAGGTCTTACCTCTGTGGCTGCAGAGGAGAGGCTCACCATTTTTGGGCACAACAAGCTTGAAGAGAAAAAGGAGAGCAAGTTTTTGAAGTTCTTGGGTTTTATGTGGAATCCTCTGTCTTGGGTTATGGAGGCTGCTGCCATAATGGCAATTGCGCTTGCAAATGGAGGGGGGAAGCCACCTGACTGGCAAGACTTTGTGGGTATCATCACTCTCCTTTTCATTAATTCAACCATTAGTTTCATTGAGGAGAACAATGCGGGTAATGCTGCAGCCGCTCTCATGGCTCGTCTTGCTCCAAAAGCCAAGGTTCTTCGAGATGGTAGGTGGAATGAGCAAGATGCCGCGGTCCTGGTTCCTGGTGATATCATCAGTATTAAACTGGGAGATATTATACCAGCTGATGCTCGTCTTCTTGAAGGGGATCCTCTAAAAATCGATCAGTCTGCACTTACAGGCGAGTCCCTGCCAGTGACAAAAGGTCCTGGTGATGGTGTGTACTCTGGTTCTACCTGCAAACAAGGAGAGATTGAGGCTGTGGTTATTGCCACTGGTGTGCATACTTTCTTTGGGAAAGCTGCTCACCTTGTAGATACCACTAATCAAGTGGGTCACTTCCAAAAGGTCTTGACCGCAATTGGGAACTTCTGCATATGCTCAATTGCTGTGGGGATGATTATTGAGATTATTGTTATGTATCCTATCCAAGACCGACAGTATCGTCCTGGAATTGATAACCTTCTAGTACTTCTCATTGGAGGAATTCCTATTGCCATGCCCACAGTTCTTTCAGTGACCATGGCTATTGGTTCTCACAGGTTATCTCAGCAGGGAGCTATCACTAAGAGGATGACAGCAATTGAAGAGATGGCAGGCATGGATGTGCTTTGCAGTGATAAAACTGGGACTCTAACATTAAACAAGTTAACTGTTGACAAAAATCTTATTGAGGTTTTTGCAAAAGGAGTGGATCCAGATACTGTTGTTTTGATGGCAGCTCGAGCCTCAAGGCTTGAGAATCAAGATGCAATAGATTCTGCCATAGTTGGGATGCTGGCTGATCCAAAAGAGGCACGAGTGGGAATCCAAGAAGTACATTTTCTTCCTTTCAATCCTACTGATAAGAGGACAGCATTAACTTACATTGATGGTGAAGGTAAAATGCATAGGGTGAGCAAAGGTGCGCCAGAGCAGATTCTCAATCTTGCACACAATAAGTTGGATATTGAACGCAGAGTCCATGCAATAATAGATAAATTTGCAGAGCGTGGTCTACGATCTCTTGCTGTAGCATACCAGGAAGTTCCAGAAGGAAGGAAGGAGAGTGCTGGGGGCCCATGGCAATTCATTGGTCTTATGCCTCTCTTTGACCCACCAAGGCATGACAGCGCAGAAACAATACGGAGGGCTCTAAACCTTGGAGTAAATGTCAAAATGATAACAGGTGATCAACTAGCTATAGGGAAGGAAACTGGCCGTCGTTTGGGGATGGGGACCAATATGTATCCCTCATCTGCATTGCTTGGGCAGGATAAGGATGAGTCCATTTCTGCACTACCTATTGATGAATTGATCGAAAAAGCTGATGGATTTGCTGGTGTTTTTCCTGAACACAAGTATGAGATTGTGAAACGCTTGCAAGCGAGGAAACATATATGTGGAATGACTGGTGATGGAGTAAATGATGCACCTGCTCTTAAAAAGGCTGACATTGGTATAGCTGTTGCTGATGCCACTGATGCCGCTCGTAGTGCATCTGATATTGTTTTAACAGAACCTGGTCTTAGCGTTATCATCAGTGCTGTTTTGACAAGCAGGGCAATCTTCCAGAGAATGAAAAATTATACAATTTATGCTGTCTCAATTACAATCCGTATTGTGCTTGGTTTCATGTTGCTGGCCCTCATATGGAAGTTTGACTTTCCTCCTTTTATGGTGCTAATCATCGCCATCCTAAATGACGGTACTATCATGACAATCTCAAAAGATAGAGTAAAACCCTCTCCTCTGCCGGATAGCTGGAAGCTGGCAGAGATATTTACTACTGGTGTTGTACTTGGAAGTTACTTGGCAATGATGACAGTGATATTCTTTTGGGCAGCATACAAAACAAATTTCTTCCCTCGAGTATTTGGGGTCTCAACTCTTGAAAAGTCTGCTCATGATGATTTCCGAAAACTTGCCTCGGCGATATATCTTCAAGTGAGCACTATCAGCCAGGCCCTTATATTTGTGACTCGGTCTCGAGGCTGGTCATATGTTGAGCGTCCTGGTATACTGTTAATGACTGCTTTTGTGATTGCTCAGCTGATCGCCACTTTGATTGCAGTATATGCAAACTGGAGCTTTGCTGCAATTGAAGGAATCGGTTGGGGTTGGGCAGGAGTAATATGGTTATACAACATCATATTTTACATCCCACTTGATTTCATCAAGTTCTTCATTCGTTATGCTTTGAGTGGCAGAGCTTGGGATCTTGTCATTGAGCAAAGGATCGCATTCACAAGGAAAAAGGACTTCGGGAAGGAACAACGGGAACTTCAATGGGCACATGCTCAAAGAACCTTACACGGATTACAAGTACCTGACACCAAATTCTCTGAACGCACACATTTCAATGAACTCAATCAAATGGCTGAAGAAGCTAAAAGGAGAGCTGAAATTGCAAGGTTAAGAGAATTGCATACACTAAAAGGTCATGTAGAATCAGTTGTGAGATTGAAGGGGCTTGACATTGACACAATTCAGCAAGCCTACACGGTCTAA 2898 0.4369 MGEKSEVLEAVLKEAVDLVTDLYNLKLLENIPIEEVFENLRCSREGLTSVAAEERLTIFGHNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLFINSTISFIEENNAGNAAAALMARLAPKAKVLRDGRWNEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAIGNFCICSIAVGMIIEIIVMYPIQDRQYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFAKGVDPDTVVLMAARASRLENQDAIDSAIVGMLADPKEARVGIQEVHFLPFNPTDKRTALTYIDGEGKMHRVSKGAPEQILNLAHNKLDIERRVHAIIDKFAERGLRSLAVAYQEVPEGRKESAGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESISALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVVLGSYLAMMTVIFFWAAYKTNFFPRVFGVSTLEKSAHDDFRKLASAIYLQVSTISQALIFVTRSRGWSYVERPGILLMTAFVIAQLIATLIAVYANWSFAAIEGIGWGWAGVIWLYNIIFYIPLDFIKFFIRYALSGRAWDLVIEQRIAFTRKKDFGKEQRELQWAHAQRTLHGLQVPDTKFSERTHFNELNQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIDTIQQAYTV 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0672 965 Pfam E1-E2 ATPase 142 320 - -
Mibi13g0672 965 FunFam Plasma membrane ATPase 353 500 - -
Mibi13g0672 965 SUPERFAMILY Calcium ATPase, transduction domain A 144 241 IPR008250 -
Mibi13g0672 965 PRINTS P-type cation-transporting ATPase superfamily signature 623 635 - -
Mibi13g0672 965 PRINTS P-type cation-transporting ATPase superfamily signature 341 355 - -
Mibi13g0672 965 PRINTS P-type cation-transporting ATPase superfamily signature 600 619 - -
Mibi13g0672 965 PRINTS P-type cation-transporting ATPase superfamily signature 517 527 - -
Mibi13g0672 965 PRINTS P-type cation-transporting ATPase superfamily signature 495 506 - -
Mibi13g0672 965 PRINTS P-type cation-transporting ATPase superfamily signature 191 205 - -
Mibi13g0672 965 SUPERFAMILY Calcium ATPase, transmembrane domain M 29 863 IPR023298 -
Mibi13g0672 965 SUPERFAMILY HAD-like 337 647 IPR036412 -
Mibi13g0672 965 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 46 822 IPR006534 GO:0008553|GO:0016020|GO:0120029
Mibi13g0672 965 CDD P-type_ATPase_H 46 857 IPR006534 GO:0008553|GO:0016020|GO:0120029
Mibi13g0672 965 Coils Coil 916 936 - -
Mibi13g0672 965 Gene3D - 338 637 IPR023214 -
Mibi13g0672 965 PANTHER CALCIUM-TRANSPORTING ATPASE 29 899 - -
Mibi13g0672 965 PRINTS H+-transporting ATPase (proton pump) signature 457 475 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi13g0672 965 PRINTS H+-transporting ATPase (proton pump) signature 572 588 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi13g0672 965 PRINTS H+-transporting ATPase (proton pump) signature 776 797 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi13g0672 965 PRINTS H+-transporting ATPase (proton pump) signature 631 656 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi13g0672 965 PRINTS H+-transporting ATPase (proton pump) signature 600 616 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi13g0672 965 Pfam Cation transporter/ATPase, N-terminus 30 93 IPR004014 -
Mibi13g0672 965 Gene3D - 106 831 - -
Mibi13g0672 965 FunFam Plasma membrane ATPase 494 648 - -
Mibi13g0672 965 Gene3D - 914 965 - -
Mibi13g0672 965 SFLD Haloacid Dehalogenase 323 651 - -
Mibi13g0672 965 Pfam haloacid dehalogenase-like hydrolase 337 614 - -
Mibi13g0672 965 Gene3D - 353 500 IPR023299 GO:0000166
Mibi13g0672 965 ProSitePatterns E1-E2 ATPases phosphorylation site. 343 349 IPR018303 -
Mibi13g0672 965 SFLD p-type atpase 323 651 IPR044492 -
Mibi13g0672 965 FunFam Plasma membrane ATPase 144 228 - -
Mibi13g0672 965 Gene3D - 144 228 - -
Mibi13g0672 965 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 575 688 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi13g0672 965 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 113 376 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi13g0672 965 FunFam ATPase 4 plasma membrane-type 585 831 - -
Mibi13g0672 965 SMART Cation_ATPase_N_a_2 27 99 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0672 Mibi-ChrMibi13 8768705 8775045 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0672 1 965 Primary Pumps ATPases AT5G62670 92.236 0.0 1786