Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0667 ATGGGGCATAAAAAACGAAACCCTGCCCCACGTGCGAAACAATCTCCGGCGGCTTCTCCGGTGACACAATCTGCCATCGGCGGAGCCGCAGACAATGGCCCTATTTCAGCCGAGTCTGAGCTATGCATGGGTTTCAATCGGAGTGTACAAGGAGCGAGTAAGGTCGAGCTTCCTATTCAATCTGAGCCTTTGGTATGTTCGACAATTAAGGTTGAATGTGAACGAGCCCTTAATGCGATTAGGCGTGGTAATCATACTAGGGCACTGAGGCTTATGAAGGAGTTATGTTTGAAACATGAGAGTTCTGCTTACTCGGCTTTGATTCATAGAGTTCAAGGTACCGTTTGTGTGAAAGTGGCGGCGATTATTGATGACCCGAGTGCGAAGCAAAGGCATTTGAAGAATGCGATTGAGTCTGCACGGAAAGCTGTTGAGCAATCGCCCAGTTCTATTGAATTCTCGCATTTCTACTCGAATTTGTTGTACGAGGCGGCGAATGATTCGGCCGAATACGAGCAGGTGGTGAAGGAGTGTGAGAGGGCACTCGTGATTCTGAATCCAATTGATCCTGCGAAGGAGAGCTTGCAGGATGAGAGAGAGCAGAAAATATCAACTGCGGAAGCCCGGATAGCGCATGTCCAGAATGAGTTGCGGCAGCTAATTCAGAAATCAAACATTGCTTCCTTATCGACATGGATGAAGAATCTGGGTAATGGGGAGGATAAATTCCGTTTCATTCCAATAAGGAGGGCTACAGAGGACCCAATGGAAGTGAGTTTGGTTCAAACTAGGAGGCCAAATGAGATTAAAAAGGTGACCAAGACACCTGAGGAGAGAAGAAAAGAAATTGAAGTTCGAGTGGCAGCTGCAAGGCTATTGCAGCAAAAGTCAGAGTCGTCCCAATCCCAGAATGAAGTGGACAGGGATGACAGGACACTGGATTCATCTTCAGGATCTGGGCAGAGAATAAGTGAGAGGCGGAAGTATAACCATGTCCGAAAAGCTGGCTCTACATCTGATAGGAGAGATTGGGTTCGTTCATTTTGGAATTCACTGAGTATTGATTTGAGGAAGGAGTTTCTTAGGATTAGGGTATGTGATCTCAAATCTCACTTTGGGTCTTCAAAGGATACTTTGCTGAATGACATAGTAGCCGAGGCTTTGACATATGCTGAGGCCAACAAAACTTGGAAATTCTGGCTTTGCTGCCACTGCAGTGAGAAGTTTTCAGATTCAGAGTCTCACATGCAGCATGTTGTGCAGGAACACATGGGGAATCTCTTACCTAAAATGCAGAGACTTTTGCCACAAAATGTTGAAAATGAATGGGTTGAGATGATTCTTAAGTGTTCTTGGAAACCTCTGGATGCTTCAGCTGCTGTCAAAATGCTTGAAAATCAAGCAAAATGCAATGGTTTTTCGTTTCTTGAGGGTTCCTTTGCAGATCAAACCGAGGAGCACCATTTTTGCTTCCAAGACACTAATAATTCTTTACCTGAAAGGGGACATAACCTTGATACATGTGTACCAGATAAAAGTAACTATTGTAACTCTCTGGAAGCTAATAGTACAGAAGGTGTTGAAGCCGAACGTTCCGTAGCATATACCCTTTCTGATGGCTGGCCATTGTCACATGACTCTGAGCGTGCAAAACTTCTTGAGAAAATTCATGCAGTATTTGATATTCTTATTAGACACAAATATCTTGCTACTAGTCATCTTAGCAAGGTCATACAATTTACCATGGGTGAGATACAGGGACTTACTGCTGGATCTCAGCTTCTGAACCGTGGTTTAGACCAATCACCGACATGCATATGCTTTTTGGGAGCCCCACAACTTAAGAAAATTCTCAAATTCTTGCAGGAACTGTCTCATGCTTGTGGTTTGAGTAGATATGCTGATAAAAGTACCAGTCCAATGGATGATTTACACAACTCAAATCAAATTCCTGAGATTAAAGAGAGGATTGTTCTCAATGGAGATGCATCATGCCTTCTTCTAGATGAATCTTTAGTGCCTGCAGAAATTACATATAGTGCAACTAAGAGTGCTGCATTGGATGATGTGATTACCCCAGCTTCTAATGATGCAGTTTTACACAATGCCGATCCTTTCTTATCTTGGATATTTTCGGATTCATCTTGTGGGGACCAATTAACATCGTGGATGAGAACAAAAGAAGATAAAAGACGTCAAGGAATTGAACTTATACAGACTCTTGAGAAGGAGTTTTATCACCTACAGAGCCTTTCTGAGAAGAAATGTGAGCGAATAAATTATGAGGAAGCATTGCAGGTAGTAGAGGACCTTTGTCTTGAAGAAGGTAAGAAGAGGGAAAATTTTTCCGAGTTTGTTCAGCGAAGCTATGGATCTGTTCTGAGAAAGCGGAGAGATGAGCTCATTGAGAGTGAGAATGATGTCATGTATGTTAGCAATAGATTTGAGTTGGATGCCATTACAAATGTTCTGCAAGAAGCAGAGGCTATGAATGTCAATCAATTTGGTTATGGGGAAAGCTATACTGGTGCATGTGACTTGGAATCTGGTGAAGATGATGGATGGAGAATGAAAGACTCTTTGCATCAAATGGATAGCTACGTAGAAGTAGCCATTCAGAAACTGAAGGAAAACCTATCTGTGGAGCTTAGCAAAATTGATGCGCGGATCATGAAAAATGTTACAGAGATGCAGCAGTTGGAACTCAAGCTTGAGCCTGTTTCTGCTTTTGATTATCGTACAATATTACTGCCTCTAACGAAGTCTTACCTTAGGGCTCATTTGGAAGATTTGGCTGAGAAAGATGCAACAGAGAAGTCTGATGCAGCCAGAGAAGCATTTCTGGCTGAGCTTGCTCTTGACTCAAAGAAGGGTGTTAAAGGGGGGAGTGACAGTGCGAAACACATGGAGAAAACAAAAGACAAGAAAAAAAATAAAGAGAACAGAAAAACAAAGGATTTGAAGGCTACATATGGTCATGAGGAGCACATTCATGATGTCACTACTCCTGATACCTATTCTGCTTCACGAGATAATGACCATGATTCGATTATTGTTTCTACGATTAATGATGACTTGGAACAACTGGAAGAGGAAGTTAGACGTAAAATTGAGTTAGAAGAGGAGGAGAAAAAACTTGAAGAAACTTTGGAGTTACAACGGCGTATAGAAAATGAGGCTAAACTGAAGCATCTTGCTGAGCAACAAAAAAAATCCTCTGCCACTTATTTGGAGAAGCCAGATGACAAAGTTTTGGATCATCAGTTAAAGGCTGCTGTTGATGGTCCAGAAGTACATGAATATATGAGACATCCTAAGCTGGAGCAGTTACCAAATGTGAATGGTTACCATAGCAATTTAGATGGTGTGCTTATTGGCACATCAAATGGTTCTGCAGTACCAAACAAACCTTTACTCGATTCAGTTAATCAAACGATTCATCATATGCATTCATCAGATATTAAGCAAGATCCGTCTAATAAAGTAGTTCCTGAGAATGGTTTTCAGTTGGCTGAGCAGCGTTCTGGAAAAAGGGGTAAACGGCATAAAAATGCTTCCAGATTGATTAATGGAAAGTTTGAGGCTGTCTCGTTGGATAAAGAGAACACTGGTGCATATACTGATAATCATTTAAGAGAGCAGGTTAAATTCCACAATAATCAAGATGCTAACAACGCGCAAGGAAACAATGGATTTATGATTCTACAAGAGTCGCATGGGGAGCATGATGAGGAGGAAAGGTTCCAAGCTGACCTAAAAAAAGCTGTACGCCAAAGTCTGGACACATATCAAGCTCTTCAAAAATTGCCTCCAGTTTCTGGATTGAGAACTTCAGATAGAACTTCTTCGCAAGTAGATAGTTATGGCGCTCCACTGGAGGAAAGCACAACTGGGAATATTGGTGGAGGTACTTTGCTTGGTACTGGGCTGAAGAATGAAGTGGGCGAATATAATTGCTTTCTCAATGTTATAATACAATCTTTGTGGCATTTGCGGCGGTTCCGCGAGGAATTTTTTAGCAGACCAAGATCAGAGCATGATCACGTGGGTAATCCTTGTGTTGTCTGTGCATTGTATGAAATCTTCACCGCCTTGGATGCTGCGTCAAAGGATTGCCAGGGAGAAGCTGTAGCCCCTACTTCTCTGAGAATAGCTCTAAGCAACCTATGTCCAGATAGTAACTTCTTCCAGGAGGCTCAGATGAATGATGCTTCTGAAGTACTGGAGGTGATATTTGACTGCCTTCATCGATCATTTACTAGTGGTTCAAGTGTTTCTGATACAGAATCAGTGGAAAGCAATTCTGTGCGATCTTGGGAGTGTGCAAATAGTAGTTGTATAGCACATTCACTCTTTGGAATGGACATTTTTGAACGGATGAATTGCCACCACTGTGGTCTTGAGTCCAGACATCTGAAGTACACTTCCTTCTTCCACAATATAAATGCCAACTCCCTTCGCACCATGAAGGTAATGTGCAGTGAAAGCTCCTTTGATGAGATTTTGAATCTGGTGGAGATGAATCATCAGTTAGCTTGTGATCCAGAAGCTGGCGGCTGTGGCAAGCTAAATTACATCCATCACTTTCTTTCAAAACCACCTCATGTCTTCACAACTGTTCTAGGCTGGCAAAATACATGCGAGAGTGCTGATGATATTAAAGCAACTTTGGCAACACTGAGCACTGAAATGGATGTTAGTGTTCTTTATCGTGGGTTAGATCCAAAAAGCATTCATAGCTTGGTATCAGTGGTATGCTACTATGGGCAACATTACCATTGCTTCGCTTATAGCCATGAACATGAACAATGGATTATGTATGATGACAAGACAGTCAAGATAATTGGCGGGTGGCTTGATGTTCTTACAATGTGTGAAAGAGGGCATCTACAACCTCAGGTTCTTTTCTTTGAAGCCGGCAAAGTATATGGCAAATTTCCGGAGAGGCAACAAGTTTTGGTATACATAGGTCAATTTTGA 4980 0.4207 MGHKKRNPAPRAKQSPAASPVTQSAIGGAADNGPISAESELCMGFNRSVQGASKVELPIQSEPLVCSTIKVECERALNAIRRGNHTRALRLMKELCLKHESSAYSALIHRVQGTVCVKVAAIIDDPSAKQRHLKNAIESARKAVEQSPSSIEFSHFYSNLLYEAANDSAEYEQVVKECERALVILNPIDPAKESLQDEREQKISTAEARIAHVQNELRQLIQKSNIASLSTWMKNLGNGEDKFRFIPIRRATEDPMEVSLVQTRRPNEIKKVTKTPEERRKEIEVRVAAARLLQQKSESSQSQNEVDRDDRTLDSSSGSGQRISERRKYNHVRKAGSTSDRRDWVRSFWNSLSIDLRKEFLRIRVCDLKSHFGSSKDTLLNDIVAEALTYAEANKTWKFWLCCHCSEKFSDSESHMQHVVQEHMGNLLPKMQRLLPQNVENEWVEMILKCSWKPLDASAAVKMLENQAKCNGFSFLEGSFADQTEEHHFCFQDTNNSLPERGHNLDTCVPDKSNYCNSLEANSTEGVEAERSVAYTLSDGWPLSHDSERAKLLEKIHAVFDILIRHKYLATSHLSKVIQFTMGEIQGLTAGSQLLNRGLDQSPTCICFLGAPQLKKILKFLQELSHACGLSRYADKSTSPMDDLHNSNQIPEIKERIVLNGDASCLLLDESLVPAEITYSATKSAALDDVITPASNDAVLHNADPFLSWIFSDSSCGDQLTSWMRTKEDKRRQGIELIQTLEKEFYHLQSLSEKKCERINYEEALQVVEDLCLEEGKKRENFSEFVQRSYGSVLRKRRDELIESENDVMYVSNRFELDAITNVLQEAEAMNVNQFGYGESYTGACDLESGEDDGWRMKDSLHQMDSYVEVAIQKLKENLSVELSKIDARIMKNVTEMQQLELKLEPVSAFDYRTILLPLTKSYLRAHLEDLAEKDATEKSDAAREAFLAELALDSKKGVKGGSDSAKHMEKTKDKKKNKENRKTKDLKATYGHEEHIHDVTTPDTYSASRDNDHDSIIVSTINDDLEQLEEEVRRKIELEEEEKKLEETLELQRRIENEAKLKHLAEQQKKSSATYLEKPDDKVLDHQLKAAVDGPEVHEYMRHPKLEQLPNVNGYHSNLDGVLIGTSNGSAVPNKPLLDSVNQTIHHMHSSDIKQDPSNKVVPENGFQLAEQRSGKRGKRHKNASRLINGKFEAVSLDKENTGAYTDNHLREQVKFHNNQDANNAQGNNGFMILQESHGEHDEEERFQADLKKAVRQSLDTYQALQKLPPVSGLRTSDRTSSQVDSYGAPLEESTTGNIGGGTLLGTGLKNEVGEYNCFLNVIIQSLWHLRRFREEFFSRPRSEHDHVGNPCVVCALYEIFTALDAASKDCQGEAVAPTSLRIALSNLCPDSNFFQEAQMNDASEVLEVIFDCLHRSFTSGSSVSDTESVESNSVRSWECANSSCIAHSLFGMDIFERMNCHHCGLESRHLKYTSFFHNINANSLRTMKVMCSESSFDEILNLVEMNHQLACDPEAGGCGKLNYIHHFLSKPPHVFTTVLGWQNTCESADDIKATLATLSTEMDVSVLYRGLDPKSIHSLVSVVCYYGQHYHCFAYSHEHEQWIMYDDKTVKIIGGWLDVLTMCERGHLQPQVLFFEAGKVYGKFPERQQVLVYIGQF 1659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0667 1659 MobiDBLite consensus disorder prediction 957 993 - -
Mibi13g0667 1659 MobiDBLite consensus disorder prediction 1272 1294 - -
Mibi13g0667 1659 MobiDBLite consensus disorder prediction 1 30 - -
Mibi13g0667 1659 PANTHER UBIQUITIN SPECIFIC PROTEINASE 1 1639 - -
Mibi13g0667 1659 MobiDBLite consensus disorder prediction 960 993 - -
Mibi13g0667 1659 Coils Coil 1019 1059 - -
Mibi13g0667 1659 Pfam Ubiquitin carboxyl-terminal hydrolase 1309 1616 IPR001394 GO:0004843|GO:0016579
Mibi13g0667 1659 MobiDBLite consensus disorder prediction 294 334 - -
Mibi13g0667 1659 ProSitePatterns Zinc finger C2H2 type domain signature. 402 423 IPR013087 -
Mibi13g0667 1659 Coils Coil 196 223 - -
Mibi13g0667 1659 Pfam Protein of unknown function (DUF629) 345 870 IPR006865 -
Mibi13g0667 1659 SUPERFAMILY Cysteine proteinases 1308 1637 IPR038765 -
Mibi13g0667 1659 CDD Peptidase_C19 1399 1638 - -
Mibi13g0667 1659 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 1308 1640 IPR028889 -
Mibi13g0667 1659 Pfam Protein of unknown function (DUF627) 75 185 IPR006866 -
Mibi13g0667 1659 Gene3D Cysteine proteinases 1304 1639 - -
Mibi13g0667 1659 MobiDBLite consensus disorder prediction 1274 1294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0667 Mibi-ChrMibi13 8676309 8684599 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0667 63 1638 C2H2 Transcription Factor Family AT3G47890 57.045 0.0 1720