Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0657 ATGGTGAGGCCTCCATGCTGCGAGAAGATCAGTGTTAAAAGGGGTGTTTGGACTCCAGAAGAAGATGCAGAGATGATGGCATTTGTCTCAAAGCATGGATCTAGTAACTGGACCTCTTTTCCCAAAAAAGCAGGTTTAAAGAAGTGTGGGAAAAGTTGCAGGCTCAGGTGGACTAATTACCTCAGGCCAGATCTTAAGCAAGATAGCTTCACACCCCAAGAAGAGGATTTAATTCTCAAGCTTCACGCAGCCATTGGAAGCAGGTGGCCTATGATTGCCCAACAACTTCCTGGGAGAACAGACAACGATGTAAAGAATTACTGGAACACAAAGCTGAAGAAGAAGCTCACTGAGATGGGAATAGACCCTATCACACACAAGCCCTTCTCTAAACTCCTAGCTGACTATGGAAACATAGGTGGTATCCAAAAACCAAGTACCCGAATTGGGTCTCTCAGTAAAGACCTGAAGAACTCCGTATTGTTCAGATCAGACCCATTTCTGAAGCTACCTTCATCTTCACCAAAATTTGAACCACCGACAACAGAAAGTTGCAGCTTTTTCAGTAACAGAGAAATGGTGATGGAGAAGGAGACAATCCCAGCAACTATATTTGGGGAAGGCTTATTCTCTTCCTCATCAATTTCATCAACTTCTTCCTCTTCTTCTATTTGTTCCAATGCTGTTCAAGAAGTTGGCTTGCCGTTACCCTTTTGTTGGAATGATTTTCTTCTTGAAGACGTTTTCCCACCTGATAACAGCCTAGAGAATAATGAAAATCCGACAACAAACGAGAATAAGAGTGAGGTGACGTCACAGAAAATCACCAACAGTGACGTTCGTTGTTCATCATCATCCTCTGAGATTTCATTCGTAGAAGCCATGCTTTATCAAGAAAATGATGAGATGTTCTTGAATTTTCCTCACCTACTGGAGGAACCGTCCACCTCTAACTACTAA 960 0.4271 MVRPPCCEKISVKRGVWTPEEDAEMMAFVSKHGSSNWTSFPKKAGLKKCGKSCRLRWTNYLRPDLKQDSFTPQEEDLILKLHAAIGSRWPMIAQQLPGRTDNDVKNYWNTKLKKKLTEMGIDPITHKPFSKLLADYGNIGGIQKPSTRIGSLSKDLKNSVLFRSDPFLKLPSSSPKFEPPTTESCSFFSNREMVMEKETIPATIFGEGLFSSSSISSTSSSSSICSNAVQEVGLPLPFCWNDFLLEDVFPPDNSLENNENPTTNENKSEVTSQKITNSDVRCSSSSSEISFVEAMLYQENDEMFLNFPHLLEEPSTSNY 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0657 319 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mibi13g0657 319 Gene3D - 68 128 - -
Mibi13g0657 319 MobiDBLite consensus disorder prediction 251 281 - -
Mibi13g0657 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mibi13g0657 319 SMART sant 13 63 IPR001005 -
Mibi13g0657 319 SMART sant 66 114 IPR001005 -
Mibi13g0657 319 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mibi13g0657 319 Pfam Myb-like DNA-binding domain 69 110 IPR001005 -
Mibi13g0657 319 CDD SANT 17 61 IPR001005 -
Mibi13g0657 319 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mibi13g0657 319 FunFam Os07g0634900 protein 69 128 - -
Mibi13g0657 319 PANTHER F14D16.11-RELATED 1 315 - -
Mibi13g0657 319 FunFam Transcription factor RAX3 7 67 - -
Mibi13g0657 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mibi13g0657 319 MobiDBLite consensus disorder prediction 253 281 - -
Mibi13g0657 319 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mibi13g0657 319 CDD SANT 69 112 IPR001005 -
Mibi13g0657 319 Gene3D - 7 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0657 Mibi-ChrMibi13 8519375 8521474 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0657 1 313 MYB Transcription Factor Family AT3G28470 44.923 2.62e-75 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi13g0657 Myb_DNA-binding 2.5e-11 CL0123