Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0654 ATGGATCCTCCTCTCATAAACGAGTCTACATTCTCCCACGCCAACCCTTCTTCCTATAGTCTCGCCGAGATTTGGCCTTTCCCTGGCTGTGGGGACCACCCTCCTCCATTGAACCTCCGTAATATGCTCCCCACACACTTAGGTCACGACAATTCCCTCCACCGTGACGCCTCCGCCGAGGAGTCCTCCGTCACTGACCAGAGCGTCGGAAACCACCGCAAGAGGAAACATGCCACCTCTGAACATGACTCCTCCAACATGCCTTCCATCATTACTGCCAACGATTTGAATGATTCTGGCAATAAAAGGATAAAATTAGGACTATCCAAGGATGAAAATGGTGGTCAAAAGGCTGAAGCTGAAGCAAGTTCAGTAGCTGGTAGCAAGTCAGCTGAACAAAGCACTAAACCTCCTGAGCCTCCTAAGGCAGACTATATACACGTGAGAGCAAGAAGAGGCCAAGCTACTGATAGCCACAGTCTTGCAGAAAGATTGAAAACTCCGTTTTGGCAGGCAAGAAGGGAGAAGATCAGCGAGAGGATGAAAATTCTGCAAGATTTGGTCCCTGGATGTAACAAGGTAATTGGTAAAGCGCTTGTCCTGGATGAGATCATCAATTATATTCAATCATTGCAGCGGCAGGTTGAGTTCCTTTCGATGAAGCTCGAAGCAGTAAACTCAAGAGTGAACATGAACCCAGCTATTGAAGGAGGGTTCCAATCAAAAGATCTTGGTGCTCAGACATTCGACGTCGCTGGAATGATATTTGGATCACAAGCAGGCAGGACATATGCCGAGGGAACACAACTCGGATGGCTGCAAATGCAGATAGGTGGTGCTTTCGAGAGAACAACATAG 858 0.4802 MDPPLINESTFSHANPSSYSLAEIWPFPGCGDHPPPLNLRNMLPTHLGHDNSLHRDASAEESSVTDQSVGNHRKRKHATSEHDSSNMPSIITANDLNDSGNKRIKLGLSKDENGGQKAEAEASSVAGSKSAEQSTKPPEPPKADYIHVRARRGQATDSHSLAERLKTPFWQARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRVNMNPAIEGGFQSKDLGAQTFDVAGMIFGSQAGRTYAEGTQLGWLQMQIGGAFERTT 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0654 285 FunFam Basic helix-loop-helix transcription factor 151 230 - -
Mibi13g0654 285 Pfam Helix-loop-helix DNA-binding domain 172 212 IPR011598 GO:0046983
Mibi13g0654 285 Gene3D - 151 235 IPR036638 GO:0046983
Mibi13g0654 285 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 153 231 IPR036638 GO:0046983
Mibi13g0654 285 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 161 211 IPR011598 GO:0046983
Mibi13g0654 285 MobiDBLite consensus disorder prediction 49 82 - -
Mibi13g0654 285 SMART finulus 160 217 IPR011598 GO:0046983
Mibi13g0654 285 MobiDBLite consensus disorder prediction 83 99 - -
Mibi13g0654 285 MobiDBLite consensus disorder prediction 41 143 - -
Mibi13g0654 285 CDD bHLH_AtBPE_like 144 233 - -
Mibi13g0654 285 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 60 253 IPR024097 GO:0006355
Mibi13g0654 285 Coils Coil 208 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0654 Mibi-ChrMibi13 8497795 8500542 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0654 1 285 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G62610 54.452 2.27e-80 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi13g0654 HLH 6e-05 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi13g0654 13 8497795 8500542 Mibi13g0654 13 8497795 8500542 ECH