Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0651 ATGCTCGAGTATATAAATATAATCACCACTCAACTCCGATTCCCTGAGTCTCACGCCGTGTCTCTCTCTCTCTCTCTTCCCTTTTTCTTCTTCTCCTCCTCTCTGACTTCCCCTTGTACGGACTCTCTTGTTGAATCCTCTAACCCGGCTCATCGGAGGATGTCTCCCAAGCTCGCCGCCGCAGATTCCGCCGTGATCGCCGGCGGTGATGTCTCCGCCGGAGAGATCATGCTGTTTGGCGTCAGAGTCGTGGTCGATTCCATGAGGAAGAGCGTGAGTATGAATAATCTCTCTCAGTATGAACATCCTCACGACGCTGCAAATAACAATAACAACAATAACGGAAACAATAAGGAAGATTCTCTCGCCGCCGGCTATGCCTCCGCCGATGATGCTGCTCCTCATAATTCCTCCAGGCATCGCGAGCGTGAGCGTAAGCGAGGAGTTCCGTGGACAGAGGAAGAGCATAAGCTGTTCTTGCTGGGATTACAGAAAGTTGGGAAAGGTGATTGGAGAGGGATCTCAAGGAACTATGTGAAAACTCGGACGCCTACACAGGTTGCGAGCCATGCTCAGAAGTACTTTCTCCGGCGAAGCAACCTCAATCGCCGTCGCCGTAGATCCAGCCTTTTTGATATCACCACCGACACGGTCTCTGCAATCCCAATGGAAGAAGATCAGATCCACCATCAAGATTATATGTCTCAATCAAATCCTGTGTGCCCTGCAGCCCCTGAAACTATCAACATGAATGGATTTCCAATGATGCCAGTGTATCCCATGAATATTGTTGGTTCTGGGATGATTTCAGTCCCAGCTTCACATCCTAATGCTTCTGAAGCCTCTAATATCACATCAAGTTCAAATTCATCAGCTGTTGATCCACCAACTTTGTCTCTTGGGTTATCCTTGTCCTCTGATCAAAGACAAACTTCATCAACTAGGCATTCATCTATACTTGCCATGTCGTGTTTCAACAATAATGGAGATAACATTATAAGTGTTGCTTGA 1011 0.4758 MLEYINIITTQLRFPESHAVSLSLSLPFFFFSSSLTSPCTDSLVESSNPAHRRMSPKLAAADSAVIAGGDVSAGEIMLFGVRVVVDSMRKSVSMNNLSQYEHPHDAANNNNNNNGNNKEDSLAAGYASADDAAPHNSSRHRERERKRGVPWTEEEHKLFLLGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVSAIPMEEDQIHHQDYMSQSNPVCPAAPETINMNGFPMMPVYPMNIVGSGMISVPASHPNASEASNITSSSNSSAVDPPTLSLGLSLSSDQRQTSSTRHSSILAMSCFNNNGDNIISVA 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0651 336 Gene3D - 149 201 - -
Mibi13g0651 336 SUPERFAMILY Homeodomain-like 145 200 IPR009057 -
Mibi13g0651 336 MobiDBLite consensus disorder prediction 134 149 - -
Mibi13g0651 336 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 143 199 IPR017930 -
Mibi13g0651 336 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 146 197 IPR006447 GO:0003677
Mibi13g0651 336 MobiDBLite consensus disorder prediction 276 310 - -
Mibi13g0651 336 PANTHER TRANSCRIPTION FACTOR KUA1 75 288 - -
Mibi13g0651 336 MobiDBLite consensus disorder prediction 100 121 - -
Mibi13g0651 336 CDD SANT 150 195 IPR001005 -
Mibi13g0651 336 SMART sant 147 197 IPR001005 -
Mibi13g0651 336 Pfam Myb-like DNA-binding domain 150 195 IPR001005 -
Mibi13g0651 336 ProSiteProfiles SANT domain profile. 146 199 IPR017884 -
Mibi13g0651 336 MobiDBLite consensus disorder prediction 100 149 - -
Mibi13g0651 336 FunFam transcription factor MYB1R1 149 200 - -
Mibi13g0651 336 ProSiteProfiles Myb-like domain profile. 143 195 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0651 Mibi-ChrMibi13 8469488 8472941 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mibi13g0651 Myb_DNA-binding 1.9e-11 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g0201 09 2575531 2577083 Mibi13g0651 13 8469488 8472941 CCT
Mibi13g0651 13 8469488 8472941 Mibi13g0651 13 8469488 8472941 ECH