Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0644 ATGGGTAGTGATGTTCTCCGGCTACAGGACCCTACTAGCAGTTCTGGTGAGCTGCATGTTCTTGCCGTCGATGACAGTTATGTTGATCGCAAGGTCATTGAGAAGTTGCTCAAAGTTTCTTCTTTCAAAGTGACGGTTGTAGAGAGTGGAACTCGAGCTCTTGAATATTTGGGATTGGATGGACAGAAGAAGAGCTCCATTGGATTTGAGAGTGTGAAGGTTAATCTGATAATGACGGACTATTCAATGCCTGGGATGACTGGATACGAGTTGCTCAAGAAGATCAAGGAATCATCCATTTTTAGAGAGATTCCAGTTGTGATAATGTCATCTGAGAATATCTTGACTCGAATTGATCGATGCTTGGAGGAAGGAGCAGAGGAGTTTCTGTTGAAGCCAGTGAAGTTGGCAGATGTGAAACGATTGAAAGAATTCATAACGAAGGGTGAAGTGAAGGAAAGTGGAGGTGGAGAGAGAAAAGAATCTCACAAAAGAAAGAGATCAGAAGATTTCAGTGCAATTCCACCAACTCAATTCTCATCTGTGTCTTGTCCTTGTGATCCATCATCTTCTTCATCTGTATTGTCCTCAAAGAAGCCTAGATTAGTAGCAGAGGTTGAATAA 624 0.4215 MGSDVLRLQDPTSSSGELHVLAVDDSYVDRKVIEKLLKVSSFKVTVVESGTRALEYLGLDGQKKSSIGFESVKVNLIMTDYSMPGMTGYELLKKIKESSIFREIPVVIMSSENILTRIDRCLEEGAEEFLLKPVKLADVKRLKEFITKGEVKESGGGERKESHKRKRSEDFSAIPPTQFSSVSCPCDPSSSSSVLSSKKPRLVAEVE 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0644 207 MobiDBLite consensus disorder prediction 173 198 - -
Mibi13g0644 207 ProSiteProfiles Response regulatory domain profile. 19 147 IPR001789 GO:0000160
Mibi13g0644 207 Pfam Response regulator receiver domain 20 139 IPR001789 GO:0000160
Mibi13g0644 207 PANTHER TWO-COMPONENT RESPONSE REGULATOR 18 205 IPR045279 GO:0009736
Mibi13g0644 207 SMART REC_2 18 143 IPR001789 GO:0000160
Mibi13g0644 207 MobiDBLite consensus disorder prediction 150 207 - -
Mibi13g0644 207 CDD REC_typeA_ARR 20 142 - -
Mibi13g0644 207 MobiDBLite consensus disorder prediction 150 171 - -
Mibi13g0644 207 Gene3D - 18 182 - -
Mibi13g0644 207 SUPERFAMILY CheY-like 17 141 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0644 Mibi-ChrMibi13 8393868 8395443 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0644 4 150 Response Regulator Gene Family AT3G48100 75.333 5.47e-76 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mibi13g0644 Response_reg 8.7e-21 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi10g1290 10 32821229 32822289 Mibi13g0644 13 8393868 8395443 ECH
Mibi13g0644 13 8393868 8395443 Mibi13g0644 13 8393868 8395443 ECH