Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0637 ATGGGCGGCAGTGGTAAACCCAGGTGGAAAATCTCATTCCATCGTAATAATTCCTCAACCTCCAAGCTCCAATCAAAAGACCCTCCCCTCGAATTCCTCTGCCCAATTTCTGGTTCTCTCATAGCCGAACCAGTCGTCGTCGCTTCCGGCCACACCTTCGAATCTGTTTCCGTTCAAGTCTGCAGAGATTTAGGCTTCTCTCCCAACCTAATAGACGGTTCTACCCCTGATTTCTCCGCTGTCATCCCGAATTTAGCCCTCAAATCCACTATTTCCAGCTGGTGCGTTAATTCCGGCGTGGAGAAACCAAACCCGCCGGAATATTCCTCCGTCGAGAGGCTCGTCCGTACAACAATGGCGTCCGCGCGAGAAAATCAAGATTCCGATAGGGAATTGCTGAAGGCGGTGCCAGATAATCCACCGGTGATATTCTCTCACGCCGCCACCGAGTTAGGTCCCCGGGTCAACCCGTTCAAAACGAGTTCATCCGAGTCAGGAATCGCCAGTGGATGTCATGAAACTCCTTTACCTCTCACAACTCGTCCCACATGTTACTCGTCTTCTTCTCTGGAAATTAGCGAGAGTGAACAACAAAACCAAAACCCTAACGGTACAATTTCAGAGGAAGAGGAGAAATTAACGGTGAAATTGAGGAGCGACGAGGCTTCTGAGCAAGAAGAAGCGGTTATTTCACTAAGAAACATAACCAAAACAAGAGAAGACACCAGAATCTCTCTCTGCACAACTGGTTTACTCTCATCACTCCGATCACTGATCTCGTCTGAGAATCGCGTCGTGCAAGTAAACGCCGTCGCGTCACTGGTCAATTTCTCACTAGCCAGATCTAACAAAGTGAAAATCGTCAGATCTGGATTCATCCCAACCCTAATTCAAATCCTGAAAACCGGATTCACCGAGGCGCAAGAACACGCCGCAGGAGCGATATTCAGCTTAGCGTTAGACGACGAGAACAAAATGGCAATCGGAGTATTAGGAGCGTTGGGGCCATTGATGAACGCGTTGAGGTCCGAGTCGGAACGGACTCGTCACGACTCAGCTCTCGCGTTGTACCACCTGACGTTGGTTCAGAGCAACAGAGTGAAGCTGGTGAAGCTCGGTGTGGTCACCACACTGTTAACAATGGTGAAATTGAGGGATCTGGCGAGCCGTGTGTTGATGATACTGTGTAATGTAGCGGCGGCGACGGAGGGGAGGACGGCGATGCTGGATGCGAATGCGGTGGAGTGTTTGGTCGGTGTTCTGAGGGAGACGGTGGCGGCGGCGGCGGAGGAGGCGACGGTGGAGCACTGTGTGGCGGCGTTGTACGGCGTGAGCAGTGGGGGTTTGAGGTTTAAGGCTTTGGCGAAGGAAGCGAAGGCTGTGGAGGTGTTGAGGGAGGTTGAAGAGAGAGGAACGGAGAGGGCGAGAGAGAAGGCCAAGAGGATGTTGCAGATGATGAGAGGAGGACAGGAAGAAGACGGTGATGGAGTCGGGTCGGGTCGGGTATTGGGCCCGGGTCGAACCCGGATCCGAGTTGGTGGCGGGAGGGATGTCCATGCGGCTAACACTACTACGTTTTAG 1581 0.525 MGGSGKPRWKISFHRNNSSTSKLQSKDPPLEFLCPISGSLIAEPVVVASGHTFESVSVQVCRDLGFSPNLIDGSTPDFSAVIPNLALKSTISSWCVNSGVEKPNPPEYSSVERLVRTTMASARENQDSDRELLKAVPDNPPVIFSHAATELGPRVNPFKTSSSESGIASGCHETPLPLTTRPTCYSSSSLEISESEQQNQNPNGTISEEEEKLTVKLRSDEASEQEEAVISLRNITKTREDTRISLCTTGLLSSLRSLISSENRVVQVNAVASLVNFSLARSNKVKIVRSGFIPTLIQILKTGFTEAQEHAAGAIFSLALDDENKMAIGVLGALGPLMNALRSESERTRHDSALALYHLTLVQSNRVKLVKLGVVTTLLTMVKLRDLASRVLMILCNVAAATEGRTAMLDANAVECLVGVLRETVAAAAEEATVEHCVAALYGVSSGGLRFKALAKEAKAVEVLREVEERGTERAREKAKRMLQMMRGGQEEDGDGVGSGRVLGPGRTRIRVGGGRDVHAANTTTF 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0637 526 Gene3D - 205 485 IPR011989 -
Mibi13g0637 526 SUPERFAMILY ARM repeat 215 486 IPR016024 -
Mibi13g0637 526 Pfam Armadillo/beta-catenin-like repeat 283 319 IPR000225 GO:0005515
Mibi13g0637 526 Pfam Armadillo/beta-catenin-like repeat 321 360 IPR000225 GO:0005515
Mibi13g0637 526 PANTHER U BOX DOMAIN-CONTAINING 23 486 - -
Mibi13g0637 526 MobiDBLite consensus disorder prediction 11 26 - -
Mibi13g0637 526 ProSiteProfiles U-box domain profile. 27 101 IPR003613 GO:0004842|GO:0016567
Mibi13g0637 526 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 291 328 IPR000225 GO:0005515
Mibi13g0637 526 MobiDBLite consensus disorder prediction 158 210 - -
Mibi13g0637 526 SMART arm_5 280 320 IPR000225 GO:0005515
Mibi13g0637 526 SMART arm_5 401 446 IPR000225 GO:0005515
Mibi13g0637 526 SMART arm_5 321 361 IPR000225 GO:0005515
Mibi13g0637 526 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 9 104 IPR013083 -
Mibi13g0637 526 SUPERFAMILY RING/U-box 19 105 - -
Mibi13g0637 526 Pfam U-box domain 29 95 IPR003613 GO:0004842|GO:0016567
Mibi13g0637 526 SMART Ubox_2 31 94 IPR003613 GO:0004842|GO:0016567
Mibi13g0637 526 MobiDBLite consensus disorder prediction 486 526 - -
Mibi13g0637 526 CDD RING-Ubox 33 68 - -
Mibi13g0637 526 MobiDBLite consensus disorder prediction 179 208 - -
Mibi13g0637 526 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0637 Mibi-ChrMibi13 8329943 8331523 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0637 1 526 U-box Gene Family AT5G65200 52.158 8.32e-177 508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi13g0637 13 8329943 8331523 Mibi13g0637 13 8329943 8331523 ECH