Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0628 ATGCAGTCCATTAGCCTAAGCTTTCATCAAAACCCATATTTGATCTTAAAGCCTTTCGTCTTATTTCACAACTTAGATCATCCAAACCCCACCCACCACCTTAAGGAAAGAAACTTTTCAGTGTATAGCCAGATGGGTCCAAATCCAAATCCCATGTGGGCACTCTTCATGGTTGTGGTGTTTACGTTTTCATTTCTTCCAATGGCTTATACAGAGGATGAAGAAGTAAAGCAGGCAATGGTGAGATTCATGGAGAAACTTGACCCAAATAATACGCCAAGAGATATGAACTGGGGTTGGAATTTATCTTCAGATCCTTGCATTGGCAAATGGTATGGGGTTCAATGTTATTCAGGAGAACAATTTGTGAAGAATATAGTTCTTGAAGATTCTGGTTTCACTGGGACTTTAGACGCAGCTTCTCTTTGTACACTTCAGCTTCTTCATGGCCTTAGCTTGAAGAACAACAACTTACATGGCCTCATACCAGAAGAACTAGGAATGTGCAAAGCATTGAATATCTTGTATTTAAGTGGAAACAATTTTTCTGGTGACCTTCCTCTTTCTGTTTCACTCTTAGGTAATCTGAAAAGGATTGATGTTTCAGATAACAACTTATCCGGAGATCTTCCTGACATGAGTCATATTACAGGGTTGATATCTTTTCATGCCCAGAATAATGAATTCACAGGGGAAATTTCCAACTTTGAATTCTCCAACCTTCAGGATTTCAATGTCTCCAATAACAATTTACAGGGTCCAATTCCTGACATGATCATAAGCTTGTTTGGAGCAGACAGTTTTTCTGGTAATCCCAACTTATGTGGGCCCCCACTTGAAAATGCATGTCCTCCTCTTCCTCCTCCTTCTCCTCCTGCAACAAAGAATGGGAAAAGTAGGAAACTTTTCAGTCGTAACTTGGCCATTTATTCTGGGTACATGATTCTTGGTGTGCTTGTCTTGTTTTACTTGGCTTTCAAGGTTGTTAAGCATTACGGAGGCAGAATGGAGCCATTGAATGGTGAGAAGAAGGAAGAAACAGGGGAAGCTAGCAAGGAAAAGACTAGAGAATCTTCCAATAATGAAGTGAATGGGATTGTGACAAGATCAGAGTATTCAATTTCATCTGTTGAGACAGGAATGGTGTCATCAAATCTGGTTGTTCTTACGAGTCCAGTGGTGAGGACACTGAGATTTGAGGACTTGCTTAGAGCTCCTGCAGAATTGGTAGGAAGAGGGAAGCATGGAAGCATGTACAAGGTGATGCTGGAAAGTGGGGTGGTTTTGGCAGTGAAGAGAATCAAAGATTTGGGGATTTCAAAGCAGGATTTTGACAAGAGAATGCACAAGTTAAACCTGGTGAAGCATCCTTGTGTACTTCCTCTTCTTGCTTTTTATTGCACCCTCCAAGAGAAGCTTTTGGTGTACGAGTTTCTGCATAATGGTAGCCTCTTCAAGATGCTCCGTGGATCTCAAAGTGGCAAAACTTTTGACTGGGGAAGCAGACTGAATGTTGCAGCCAACATAGCTGAAGCCTTAGCCTACATGCACGAGGAGCTTCGTGAAAGTGGTATAGCTCACGGAAACTTAAAATCCAGCAACATATTATTTGACAAGAACATGGATCCATGCTTAAGCGAATATGGATTAATGGCGATTGAGAATCAAGATAAATTTGTCTTCTATGGAGACCAAAGCAGCATGAAGAACAACAGAAATAATAACAGAAGAAATCCCAGTGAAGCTTATAGCACCTTCAAGGTGGACACATATGCATTTGGGGTTGTGCTTCTTGAACTTTTGACAGGAAAAGTGGTTCAGAACAATCATGGGTTTGATCTGGTTCGGTGGGTTAACTCAGTGGTGAGGGAGGAATGGACAGTGGAAGTATTTGATAAGTGTTTGATGACAGAAGAAGAAGGTAATGATGAAGAGAGGATGATGAGTTTGTTGCAGATAGCGCTGAAATGTGTGAGTGCTAATCCAAATGAGAGACCAAGTATGAGTGAAGTTGCAGTAATGACCATTTCTTTGAAAGAGGAACAAGACAGATCCATAACCTTCAACCCCTAA 2073 0.4105 MQSISLSFHQNPYLILKPFVLFHNLDHPNPTHHLKERNFSVYSQMGPNPNPMWALFMVVVFTFSFLPMAYTEDEEVKQAMVRFMEKLDPNNTPRDMNWGWNLSSDPCIGKWYGVQCYSGEQFVKNIVLEDSGFTGTLDAASLCTLQLLHGLSLKNNNLHGLIPEELGMCKALNILYLSGNNFSGDLPLSVSLLGNLKRIDVSDNNLSGDLPDMSHITGLISFHAQNNEFTGEISNFEFSNLQDFNVSNNNLQGPIPDMIISLFGADSFSGNPNLCGPPLENACPPLPPPSPPATKNGKSRKLFSRNLAIYSGYMILGVLVLFYLAFKVVKHYGGRMEPLNGEKKEETGEASKEKTRESSNNEVNGIVTRSEYSISSVETGMVSSNLVVLTSPVVRTLRFEDLLRAPAELVGRGKHGSMYKVMLESGVVLAVKRIKDLGISKQDFDKRMHKLNLVKHPCVLPLLAFYCTLQEKLLVYEFLHNGSLFKMLRGSQSGKTFDWGSRLNVAANIAEALAYMHEELRESGIAHGNLKSSNILFDKNMDPCLSEYGLMAIENQDKFVFYGDQSSMKNNRNNNRRNPSEAYSTFKVDTYAFGVVLLELLTGKVVQNNHGFDLVRWVNSVVREEWTVEVFDKCLMTEEEGNDEERMMSLLQIALKCVSANPNERPSMSEVAVMTISLKEEQDRSITFNP 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0628 690 SUPERFAMILY Protein kinase-like (PK-like) 407 674 IPR011009 -
Mibi13g0628 690 Gene3D Phosphorylase Kinase; domain 1 379 478 - -
Mibi13g0628 690 PANTHER OS05G0588300 PROTEIN 55 679 - -
Mibi13g0628 690 Pfam Protein kinase domain 408 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0628 690 MobiDBLite consensus disorder prediction 337 359 - -
Mibi13g0628 690 Gene3D Ribonuclease Inhibitor 238 280 IPR032675 -
Mibi13g0628 690 ProSiteProfiles Protein kinase domain profile. 404 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0628 690 FunFam Nuclear pore complex protein NUP107 73 235 - -
Mibi13g0628 690 Gene3D Ribonuclease Inhibitor 75 235 IPR032675 -
Mibi13g0628 690 MobiDBLite consensus disorder prediction 337 363 - -
Mibi13g0628 690 SUPERFAMILY L domain-like 100 279 - -
Mibi13g0628 690 Gene3D Transferase(Phosphotransferase) domain 1 479 688 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0628 Mibi-ChrMibi13 8215878 8218541 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0628 100 674 Receptor kinase-like Gene Family AT1G68400 36.349 1.72e-95 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mibi13g0628 Pkinase 2.5e-25 CL0016