Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0627 ATGGTGCTCGGATCATTCATTAATCTGTCCAATGTCATTGGAGGAGTCAATTCGAGTTCCCCCCAAATTTCTAGAGCTCTACCGGGAGTCAGTAATTATCCGGGAAGTATGTCTAAGGATGATGATGATGTTCCACATGATTCCTCATCAGAAGACAGGCAAAGGATAGTCATAGTAGCGAATTTTCTTCCTCTCAATGCCCAACAGGATAATTCTGGCAAGTGGTGCTTTAGCTTTGACGAAGATTCCATTTTATTGCAACTTAAAGATGGTATCTCTCATGATATTGACGTTTTTTATGTGGGTTCACTGAATATCGATGTTGAAGAAAGCATACAAGACCAAGTTTCTCTTGAGTTGCTAGAGGAATTCAAGTGCTTGCCTATATTTATTCCACCAAACATCCGTAAAAGCTATTATGAAGGATTCTGCAAGCAGTATTTGTGGCCTTTGTTCCATTATATGATGCCTATGAATCCTGCTTATGGAAATCACTTTGATGCGTTACTTTGGAAAGCTTATGTTTCTGTTAATGTAAAATTCATAGCTAAGATCATCGAGGCTATTAACAATCCAGGAGAAGATTATGTTTGGATTCATGATTATCATCTCATGGCCCTACCAATGTTTCTGCGCAGGCGGTACAATTGTTGCAAACTAGGATTTTTCCTCCACAGTCCATTTCCTCCACTGGAAATTTATACGACTCAGCCTATTGGAGAGCACATTTTGAAAGCCCTGCTTAATTCTGATTTAATAGGCTTCCAAACATTTGAATATGCTCACCACTTTTTGTCTTGCTGCAGTCAGATGCTTGGCTTGGAATATAAATTTAAAAGGGGTTACATTGAGATTGAATACTTAGGCCGAAAGGTGGGCATTAAAATTTTGCCTTCTGGGATTCATATGGGTCGACTTCATTCTTCCTTAAACCACCCATCTTCGTCCGTCAAAGTTAGAGAAATCCGTGAGAAATTTAAGGGGAAAATACTCATTCTTGGTGTTGATGATTTGGACATATTCAAAGGCATCGGTCTAAAGCTCTTGGCCGTAGAACAACTCCTACAGAAGAGGTCATCTTTGCGAGGTAAATTAGTTGTTGTCCAAATTGTGAATCCCCCAAGGAGAACTGGCAGAGATATTGAGGATGCAAAGAGAGAAACATACCTTGCTGCTCAAAGGATAAATGAAAGGTTTGGTTTTCCCGGATATGAACCCGTCATTATAATTGATCGTCCTATTCCTTTCTATGAGAAGGCAGCCTACTATGCTTTGGCAGAATGTTGCATTGTGAATGCAGTGAGGGATGGTATGAATTTAGTTCCTTACATGTATATTGCCTATAGGCAGGGGACTCCAGAGATGGATGAAGTATTACACATCGATTCTGAGTCGCTTCATACAAGTGCGCTTGTTGTTTCTGAGTTCATAGGTTGCTCACCTTCTCTAGGTGGGGCTTTCAGGGTGAACCCTTGGGATATAAATGCTGTGGCTGATGCTCTAAGTTCAGCCATTGACTTGCCTATTACACAAAAACACTTGAGCCATGAGATGCACTTCCGACATGTTAGCTCTCATGATGTGGCTTACTGGGCCAGAGGTTTTATGCAAGATCTTGAGCGCTCATGCATCAATCACAATACTAACCTTTTCTTGGGCCTTGGATTAAGTTTTGATTCCAGAGTCATGTCCTTTCCTCAGAATTTTTGTAAGCTACTCGTCGAGCATGTCGTCTCTGCATACGAAAAGACTAAGCATAGGGCAATATTTCTGGACTATGATGGTACAGTTGTTCCTGAAACCTCCATTGTGAAAAGCCCTACTCCTGAACTCATATCTATTATCAATGACCTCTGCAATGACCCGAAGAACACCGTGTTTATAGTAAGTGGCAGGGGTAGGACCCCATTAATTGATTGGTTTGATTCATGTGAGAATCTTGGTATAGCAGCTGAGTATGGTTATTTTATAAGGTGGGATAAAAATTCAGGCTGGGAAACCTGTGGTTTAGTCACTGATTTTTCTTGGAAAAGCATTGTTGAACCAGAAATGAGATCATACTCTGAATTAACCCAGGGCTCCTATATAGAGAGCAAGGAGAGTGGCCTGGCATGGCATAATCATGAAGATGGTTCTTTTGGTTCTGAATATGGATATTTTAAAGCCAAGGAGCTGTTGGGTCGCCTTGGTAGTGTTCTTGCAAACGAGCCTGCTGTTGTTAAAAAGAGAGGTGATATTGTTGAAGTCAATCCACAGGGAATTACTAAAGGCTTGGTCATAGAGAAAGTTCTTTCTACCCTAAAAATGAAAGGGATATCAGTGGATTTTGTGCTGTGCATCGGGGACGATAAATCGGATGAGGATATGTTTGAAAGCCTGTCAAGCCAAGCTCCTGATGGAATGCTATCTCCAGAAGCAGAGATCTTTACTTGCATTGTTGAAGCAAAACCTAGCAAAGCTAAGTACTTCTTAAATGATCCTACTGAAGTGAAGAGTCTGCTTCAAGCCCTTGCTGCTTCAGGGTCTGAATCAAAGAAGCTGATGGGAGGGGATATCCCTTTTTAA 2565 0.4105 MVLGSFINLSNVIGGVNSSSPQISRALPGVSNYPGSMSKDDDDVPHDSSSEDRQRIVIVANFLPLNAQQDNSGKWCFSFDEDSILLQLKDGISHDIDVFYVGSLNIDVEESIQDQVSLELLEEFKCLPIFIPPNIRKSYYEGFCKQYLWPLFHYMMPMNPAYGNHFDALLWKAYVSVNVKFIAKIIEAINNPGEDYVWIHDYHLMALPMFLRRRYNCCKLGFFLHSPFPPLEIYTTQPIGEHILKALLNSDLIGFQTFEYAHHFLSCCSQMLGLEYKFKRGYIEIEYLGRKVGIKILPSGIHMGRLHSSLNHPSSSVKVREIREKFKGKILILGVDDLDIFKGIGLKLLAVEQLLQKRSSLRGKLVVVQIVNPPRRTGRDIEDAKRETYLAAQRINERFGFPGYEPVIIIDRPIPFYEKAAYYALAECCIVNAVRDGMNLVPYMYIAYRQGTPEMDEVLHIDSESLHTSALVVSEFIGCSPSLGGAFRVNPWDINAVADALSSAIDLPITQKHLSHEMHFRHVSSHDVAYWARGFMQDLERSCINHNTNLFLGLGLSFDSRVMSFPQNFCKLLVEHVVSAYEKTKHRAIFLDYDGTVVPETSIVKSPTPELISIINDLCNDPKNTVFIVSGRGRTPLIDWFDSCENLGIAAEYGYFIRWDKNSGWETCGLVTDFSWKSIVEPEMRSYSELTQGSYIESKESGLAWHNHEDGSFGSEYGYFKAKELLGRLGSVLANEPAVVKKRGDIVEVNPQGITKGLVIEKVLSTLKMKGISVDFVLCIGDDKSDEDMFESLSSQAPDGMLSPEAEIFTCIVEAKPSKAKYFLNDPTEVKSLLQALAASGSESKKLMGGDIPF 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0627 854 MobiDBLite consensus disorder prediction 27 50 - -
Mibi13g0627 854 Gene3D Glycogen Phosphorylase B; 308 525 - -
Mibi13g0627 854 CDD GT20_TPS 55 540 IPR001830 GO:0003824|GO:0005992
Mibi13g0627 854 TIGRFAM T6PP: trehalose-phosphatase 585 838 IPR003337 GO:0003824|GO:0005992
Mibi13g0627 854 CDD HAD_TPP 588 830 - -
Mibi13g0627 854 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 586 703 - -
Mibi13g0627 854 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 719 849 - -
Mibi13g0627 854 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 588 793 IPR006379 -
Mibi13g0627 854 Gene3D Glycogen Phosphorylase B; 46 307 - -
Mibi13g0627 854 Pfam Trehalose-phosphatase 590 827 IPR003337 GO:0003824|GO:0005992
Mibi13g0627 854 FunFam Alpha,alpha-trehalose-phosphate synthase 309 524 - -
Mibi13g0627 854 Pfam Glycosyltransferase family 20 55 540 IPR001830 GO:0003824|GO:0005992
Mibi13g0627 854 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 42 838 IPR001830 GO:0003824|GO:0005992
Mibi13g0627 854 Gene3D - 719 848 IPR023214 -
Mibi13g0627 854 Gene3D - 586 686 IPR023214 -
Mibi13g0627 854 SUPERFAMILY HAD-like 587 838 IPR036412 -
Mibi13g0627 854 FunFam Trehalose-6-phosphate synthase 8 50 308 - -
Mibi13g0627 854 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 54 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0627 Mibi-ChrMibi13 8211847 8214588 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0627 21 845 Trehalose Biosynthesis Gene Families AT1G23870 58.243 0.0 996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g0243 09 2966276 2972837 Mibi13g0627 13 8211847 8214588 CCT
Mibi13g0627 13 8211847 8214588 Mibi13g0627 13 8211847 8214588 ECH