Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0626 ATGATGAATGGATACGCTTCTTCTTCATCTCTATCACTACGAAACCGTTTCCCAAAATCCTTCTCCCTCAGAAAGAAAGTCCCCTGGTGGTACCAAATCCTCGATCCCAAATCCGAATTCGTCGATCGCTGGAATCGCACCTTCCTTTATGCTAGCTTCCTCGCTCTCTTCCTTGACCCTCTCTACTTCTATTTCCCCATCATTGGCAACCAGAATTGCATGCAAATCGACCTCGTCCTTGGTGTCTTCATCACTTTATTCCGTACGCTCAACGACATCTTCTTCGTCTTCCACATTGTTCTTAAATTCCGTACCGCCTATTTCGCTTCTCACTCTTTCGGCCGCGGCGATCTCGTCACCGATCCTTACCTCATCGCCGTTCGTTATCTTAAAACTGATTTCACCTTCGATTTCCTCGCTTGCCTTCCTCTCCCTCAGATTGTGATCTGGTTTATAATTCCTGCGTTTAAAGATACAACGGCGGCTCATGCGAATCATACCATTTCTCTCATTGTTCTTCTCCAGTTCATTCCTCGGTTCTTCCAGATTTTCCCTCTTCAACGACGGATTGTGAAAACCAGTGGCCTTATAGCCAAGACGGCTTTGGCTGGGTCTTTGTACAATCTTGCTTTTTACGTGTTGGCCAGCCATGTTTTAGGTGCTGCGTATTACTTGTTAGCGATTAATCGACAGTCTCAATGTTGGAGAGAAACTTGTGTGAAGGAAGCCAATGCAACACACTCTCCATCTTGTTCGCCTCAATTTCTTGATTGTGACTCACTGGGCGATCCTGCTCGGGCTGCTTGGTATCAACAAACTTACCTTACTGTCGTCTGTGATGCTAAGAATGAAGATAGCCCCTTTGAATTTGGAATTTACGCCGATGCTTTTACCGATGAAGTTGCCTCATCTAGGTTCATTGAAAGATACTTTTATTGCCTTTGGTGGGGTTTGAAGAGTCTATGTGCTTATGGACAAAATCTTGAAACAAGCGTCTTCGTTTCTGAATCTTTATTTGCGAGTTTCATCTGCGTTGCAGGTCTAATTCTCTTTGCACTTCTCATTGGTAACATGCAGAACTATTGGCAATCTACTACTGCAAGACTTGAAGAATGGAGAATCAAACAGAGAGATACGGAAGAATGGATGAGGCATCGTCAACTTCCACCAGAACTGCAAGACCGTGTGCGTCGGTTTGTCCAATACAAATGGCTAGCCACTAGAGGTGTAGATGAAGAAACTATTTTGAGCTCTTTACCTTTGGACCTCCGGCGTCAGATTCAGAGACATATTTGTTTTGCTCTCGTTCGTCGGGTTCCATTTTTTGGTCAAATGGATGATCAGCTGCTAGATGCCATATGTGAACGCCTTATGTCCTCCCTGAACACAAAAGACACGTACTTAATAAGGGAAGGAGACCCGGTAAAAGAAATGCTCTTCATCATTAGAGGGCAAGTGGAGAGCTTCTCCACAGATGGTGGGAGGTCTGGATACTTCAACTCTATAACCCTAAGACCAGGTGATTTCTGTGGTGAAGAACTGTTGACTTGGGCTTTGTCCCCCAATTCTAGTAGCCTTCCATCTTCCACTCGAACCGTAAAGACCCTCACTGAATTGGAAGCATTTGCCCTCAGAGCTGAAGACGTGAAATTCTTTTGTATGCAATTCAAGAGGCAGCATATCAAGAAGATTCAACATGCTTTCAGGTATTACTCTCACCAATGGAGAGCTTGGGGGGCTAGTTTTATACAGGCTGCATGGAGACGCCATGTGAAGAAGAAGTTGGCAATGGAGCTTTTGGAGAGAGAGAATCTGTTAGGATTGGATGATGCAGAGACTGGTTCCTCGGTAGAGAGCTCAACAGGGAAGGCTATTTCTGTTGGAAGCCTTTCGAGTACCTTTTTGGCTTCCAAGTTTGCTAAAAACACCAAAAAACCTGGGGTATGTCTTCAAAATGTGACAATCCCCGATGAAAAAAGCTTGAAGATGCCGAAGCTGTTTAAGCCTACAGACCCTGACTTCTCAACAGAGTAA 2034 0.4469 MMNGYASSSSLSLRNRFPKSFSLRKKVPWWYQILDPKSEFVDRWNRTFLYASFLALFLDPLYFYFPIIGNQNCMQIDLVLGVFITLFRTLNDIFFVFHIVLKFRTAYFASHSFGRGDLVTDPYLIAVRYLKTDFTFDFLACLPLPQIVIWFIIPAFKDTTAAHANHTISLIVLLQFIPRFFQIFPLQRRIVKTSGLIAKTALAGSLYNLAFYVLASHVLGAAYYLLAINRQSQCWRETCVKEANATHSPSCSPQFLDCDSLGDPARAAWYQQTYLTVVCDAKNEDSPFEFGIYADAFTDEVASSRFIERYFYCLWWGLKSLCAYGQNLETSVFVSESLFASFICVAGLILFALLIGNMQNYWQSTTARLEEWRIKQRDTEEWMRHRQLPPELQDRVRRFVQYKWLATRGVDEETILSSLPLDLRRQIQRHICFALVRRVPFFGQMDDQLLDAICERLMSSLNTKDTYLIREGDPVKEMLFIIRGQVESFSTDGGRSGYFNSITLRPGDFCGEELLTWALSPNSSSLPSSTRTVKTLTELEAFALRAEDVKFFCMQFKRQHIKKIQHAFRYYSHQWRAWGASFIQAAWRRHVKKKLAMELLERENLLGLDDAETGSSVESSTGKAISVGSLSSTFLASKFAKNTKKPGVCLQNVTIPDEKSLKMPKLFKPTDPDFSTE 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0626 677 Gene3D Jelly Rolls 439 558 IPR014710 -
Mibi13g0626 677 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 22 674 - -
Mibi13g0626 677 FunFam Cyclic nucleotide-gated ion channel 1 368 432 - -
Mibi13g0626 677 SUPERFAMILY cAMP-binding domain-like 370 564 IPR018490 -
Mibi13g0626 677 Pfam Cyclic nucleotide-binding domain 464 555 IPR000595 -
Mibi13g0626 677 Gene3D - 61 364 - -
Mibi13g0626 677 SUPERFAMILY Voltage-gated potassium channels 36 363 - -
Mibi13g0626 677 SMART cnmp_10 441 571 IPR000595 -
Mibi13g0626 677 Pfam Ion transport protein 44 368 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mibi13g0626 677 ProSiteProfiles cAMP/cGMP binding motif profile. 441 526 IPR000595 -
Mibi13g0626 677 Gene3D Helix hairpin bin 367 432 - -
Mibi13g0626 677 FunFam Cyclic nucleotide-gated ion channel 1 439 556 - -
Mibi13g0626 677 CDD CAP_ED 441 555 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0626 Mibi-ChrMibi13 8205893 8208843 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0626 9 674 Ion Channels AT3G48010 59.829 0.0 849