Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0620 ATGAAGGAGGGGGAAGAGGGGTTTGTGAGGGCGGATCAAATTGATCTCAAGAGTATAGATGAGCAACTAGAGAAACACATGAACAAGGCTTTGACCATGGAGAAGAAGAACAAGACCAAAGATGATAAGGAAGATGATGTTGGTGCTACTAATATAGTAATTATGAGCCCTAGGGCCATTAAACCTAAGGGTGGGCCCACCACTACCAGCACCTTCAAGAAGCAAAAGCATGACTGGGAAATTGACCCTTCCAAGCTCATCATCAAGTCTGTCATAGCTCGTGGCACTTTCGGCACTGTTCATCGTGGATTCTACGACGGCCAAGACGTCGCCGTTAAATTGCTGGACTGGGGTGAAGAAGGCCAAAGAACAGAAGCTGAAATTGCTGCCCTTAGGGCGGCGTTTATACAGGAAGTTGCTGTTTGGCATAAACTTGATCATCCCAATGTCACTAAGTTTATTGGAGCGACAATGGGGTCGTCAGAACTGCAGGTACAAACTGAGAATGGGCTAATCAGCATGCCAAGCAATATCTGTTGTGTAGTTGTGGAGTATCTTCCCGGGGGTGCACTGAAATCATACCTCATAAAAAACCGTAGAAGGAAGTTAGCTTTTAAGGTGGTCATCCAGCTTGCATTAGATCTTGCAAGAGGGCTGAGTTATCTTCACTCTCAAAAGATTGTCCATAGAGATGTAAAGACAGAGAACATGTTATTGGATAAGTCACGTACAGTTAAAATTGCTGACTTTGGGGTCGCACGTGTAGAGGCTTCAAATCCTAATGACATGACAGGGGAAACCGGTACCCTCGGTTACATGGCTCCAGAGGTGTTAAATGGAAAGCCCTATAACAGGAAGTGTGATGTGTACAGTTTTGGCATCTGTTTATGGGAGATATATTGCTGTGACATGCCATACGCTGACCTTAGTTTTTCAGAGGTTACCACAGCTGTTGTTCGTCAGAATCTGAGACCAGAGATACCAAGATGTTGCCCAAATTCTCTAGCAAATGTAATGAAGAGATGCTGGGATGCCAATCCTGAAAAGCGGCCCGAGATGGATGAGGTGGTTTCCTTGCTAGAAGCCATTGACACATCAAAAGGTGGAGGCATGATCCCCCTTGATCAACAGCAAGGTTGTCTTTGTTTCCGCAAGTTCAGAGGACCATGA 1170 0.4538 MKEGEEGFVRADQIDLKSIDEQLEKHMNKALTMEKKNKTKDDKEDDVGATNIVIMSPRAIKPKGGPTTTSTFKKQKHDWEIDPSKLIIKSVIARGTFGTVHRGFYDGQDVAVKLLDWGEEGQRTEAEIAALRAAFIQEVAVWHKLDHPNVTKFIGATMGSSELQVQTENGLISMPSNICCVVVEYLPGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLHSQKIVHRDVKTENMLLDKSRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGKPYNRKCDVYSFGICLWEIYCCDMPYADLSFSEVTTAVVRQNLRPEIPRCCPNSLANVMKRCWDANPEKRPEMDEVVSLLEAIDTSKGGGMIPLDQQQGCLCFRKFRGP 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0620 389 PRINTS Tyrosine kinase catalytic domain signature 287 309 IPR001245 GO:0004672|GO:0006468
Mibi13g0620 389 PRINTS Tyrosine kinase catalytic domain signature 221 239 IPR001245 GO:0004672|GO:0006468
Mibi13g0620 389 PRINTS Tyrosine kinase catalytic domain signature 331 353 IPR001245 GO:0004672|GO:0006468
Mibi13g0620 389 PRINTS Tyrosine kinase catalytic domain signature 183 196 IPR001245 GO:0004672|GO:0006468
Mibi13g0620 389 Gene3D Phosphorylase Kinase; domain 1 74 169 - -
Mibi13g0620 389 ProSiteProfiles Protein kinase domain profile. 86 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0620 389 FunFam Kinase suppressor of Ras 1 75 170 - -
Mibi13g0620 389 SMART serkin_6 86 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0620 389 Coils Coil 16 36 - -
Mibi13g0620 389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672|GO:0006468
Mibi13g0620 389 Pfam Protein tyrosine and serine/threonine kinase 88 360 IPR001245 GO:0004672|GO:0006468
Mibi13g0620 389 FunFam Serine/threonine-protein kinase HT1 186 371 - -
Mibi13g0620 389 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 73 363 - -
Mibi13g0620 389 SUPERFAMILY Protein kinase-like (PK-like) 67 360 IPR011009 -
Mibi13g0620 389 CDD STKc_MAP3K-like 92 360 - -
Mibi13g0620 389 Gene3D Transferase(Phosphotransferase) domain 1 186 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0620 Mibi-ChrMibi13 8148521 8151810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0620 8 389 MAP Kinase Kinase Kinase AT3G22750 65.026 0.0 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Mibi13g0620 PK_Tyr_Ser-Thr 1.9e-63 CL0016