Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0618 ATGGCTATCAGAGGCGTTGATTTTAAGTGGTACGATGGGTTTTTTTTGTCGATGCTCGCTACTAGTGTAATTATTGTCGCGATTAATTGGAAGCGGTATCATACCTGCACACACCCTTTGCACATATGGATTGTGGTTGACTACTCTACTGTGTTTATCTTTCGGTTGATGATGTTTGTTGATAATGGACTTTCTGCGGGAATGGGTTTAGACTTTGGGTGGCAGCAGAGATATGCTCGCTTCTGTGGAAGAGTAGTGGTCCTCTCAATCCTTGCTTTGCTTCTATATCCATTTCTTTGGGCTTGGACTATCATTGGTACCCTCTGGTTCACTAGTGCCAGGAATTGTTTGCCTGAAGAGGGTCAGAAATGGGGCTTCCTCATCTGGTTACTTTTCAGTTACTGTGGACTGCTTTGCGTTGCTTGCATGTCATTAGGCAAGTGGTTGACCCGAAGACAGGCACATTTGTTGCGTGCCCAGCAGGGTATTCCTGTGTCTGAATATGGAGTTCTGGTGGACATGATCCGAGTGCCTGATTGGGCGTTTGAAGCTGCTGGTCAGGAAACAAGAGGTATGGGCCAAGATGCTGGTGCATATCATCCTGGACTTTACCTAACCCCTGCTCAGAGAGAAGCAGTTGAAGCTTTAATTCAGGAACTCCCAAAGTTCAGGTTGAAGGCTGTTCCAACTGACTGTAGTGAATGCCCCATCTGCTTAGAAGAATTCTATGAGGGGAATGAGGTCCGTGGTCTGCCTTGCGCTCATAATTTTCATGTTGAATGCATTGATGAGTGGCTTCGTCTTAATGTAAAATGTCCTCGGTGCCGCTGTTCGGTATTTCCAAATCTTGACCTTAGTGCTCTGTCTAACCTCCGTCCTGAATCAGAACGATCTTCTGCCAGTGTTGTGACAGCAACGAGATATGTGAGAGGCCAACCTTCTAGTCAGAGTTACTTGTTGAGATTACAGGGTCTTCTTCGCCCGGTGCGTTCAGAAATTGCTGGACCAGGTGATGAGGTGGGCAATACTTTGGAAAATGCAGAGAATGGTAGTGTGCCTGAAATGCCACGAAATGCATCAACTAGAGGCCAAGGCCCTTCAGTTGAATGCATGCCTGTGAGCCTCTCGTCTGCACAAAACTAG 1143 0.4672 MAIRGVDFKWYDGFFLSMLATSVIIVAINWKRYHTCTHPLHIWIVVDYSTVFIFRLMMFVDNGLSAGMGLDFGWQQRYARFCGRVVVLSILALLLYPFLWAWTIIGTLWFTSARNCLPEEGQKWGFLIWLLFSYCGLLCVACMSLGKWLTRRQAHLLRAQQGIPVSEYGVLVDMIRVPDWAFEAAGQETRGMGQDAGAYHPGLYLTPAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFYEGNEVRGLPCAHNFHVECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRPESERSSASVVTATRYVRGQPSSQSYLLRLQGLLRPVRSEIAGPGDEVGNTLENAENGSVPEMPRNASTRGQGPSVECMPVSLSSAQN 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0618 380 CDD RING-H2_RNF111_like 234 278 - -
Mibi13g0618 380 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 204 281 IPR013083 -
Mibi13g0618 380 FunFam E3 ubiquitin-protein ligase SIS3 203 281 - -
Mibi13g0618 380 Pfam Ring finger domain 234 276 IPR001841 -
Mibi13g0618 380 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SIS3 1 359 IPR044793 GO:0004842|GO:0010182
Mibi13g0618 380 MobiDBLite consensus disorder prediction 344 380 - -
Mibi13g0618 380 ProSiteProfiles Zinc finger RING-type profile. 235 276 IPR001841 -
Mibi13g0618 380 SUPERFAMILY RING/U-box 217 284 - -
Mibi13g0618 380 MobiDBLite consensus disorder prediction 333 380 - -
Mibi13g0618 380 SMART ring_2 235 275 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0618 Mibi-ChrMibi13 8131266 8134858 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0618 58 353 C3H Transcription Factor Family AT3G47990 74.247 1.15e-159 448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi13g0618 13 8131266 8134858 Mibi13g0618 13 8131266 8134858 ECH