Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0612 ATGGAAGGTGGCCATGAATATAAGAAGGGGCTCTGGAATTCTGAGGAAGACAATATCTTAATGGACTACGTGAAGCAGCATGGTGTAGGCAAGTGGAACCGTATCGCTAAACTCACAGGATTGAAGAGATGTGGCAAAAGTTGCAGGCTGAGATGGATGAACTACCTCAGTCCGAATGTGAAAAGAGGAGGTTTCTCAGAAGAAGAAGACGACCTTATTATTCGCCTCCACAATCTTCTAGGAAATAGGTGGTCATTGATAGCAGGGAGGGTGCCAGGTAGGACAGACAATCAAGTGAAGAACTATTGGAACACTCATTTGGGCAAAAAGTTGGGTGTTCAAAAGAAGGGAAAGACCAAAGTGTGTCAAGCTGCGAAGCCAACCTGTACTGAATCAAACGACGTTGTTTCTAACAATATTAGCTTGAATCCTTTGGAGGGGGCTTTAAATTGTATGGAAGAGGGTGAGATTGGGAGGTTTCTTGAAGATACGGAGGATATCACAAGCATGCAGGAGAATATTATGAGTGATTATTTTGAGACCAACTTTTTGTTTGCCGACAACAATGGAAGTGGCCTTTATGATCCTTCCTCAGTCGCTGAGCCTTTCCAAGACTACTTTGTTGACCTTGATTGGGCTGCCTTGTAA 648 0.4367 MEGGHEYKKGLWNSEEDNILMDYVKQHGVGKWNRIAKLTGLKRCGKSCRLRWMNYLSPNVKRGGFSEEEDDLIIRLHNLLGNRWSLIAGRVPGRTDNQVKNYWNTHLGKKLGVQKKGKTKVCQAAKPTCTESNDVVSNNISLNPLEGALNCMEEGEIGRFLEDTEDITSMQENIMSDYFETNFLFADNNGSGLYDPSSVAEPFQDYFVDLDWAAL 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0612 215 Gene3D - 9 61 - -
Mibi13g0612 215 ProSiteProfiles Myb-like domain profile. 4 56 IPR001005 -
Mibi13g0612 215 SUPERFAMILY Homeodomain-like 7 103 IPR009057 -
Mibi13g0612 215 Gene3D - 64 134 - -
Mibi13g0612 215 ProSiteProfiles Myb-like domain profile. 57 107 IPR001005 -
Mibi13g0612 215 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 4 56 IPR017930 -
Mibi13g0612 215 CDD SANT 65 107 IPR001005 -
Mibi13g0612 215 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 6 130 - -
Mibi13g0612 215 Pfam Myb-like DNA-binding domain 62 107 IPR001005 -
Mibi13g0612 215 Pfam Myb-like DNA-binding domain 9 56 IPR001005 -
Mibi13g0612 215 FunFam Transcription factor WER 63 134 - -
Mibi13g0612 215 FunFam MYB-related transcription factor 8 61 - -
Mibi13g0612 215 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 57 111 IPR017930 -
Mibi13g0612 215 CDD SANT 12 56 IPR001005 -
Mibi13g0612 215 SMART sant 61 109 IPR001005 -
Mibi13g0612 215 SMART sant 8 58 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0612 Mibi-ChrMibi13 8045044 8045887 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0612 5 113 MYB Transcription Factor Family AT5G40330 83.486 9.77e-66 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi13g0612 Myb_DNA-binding 1.4e-15 CL0123