Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0596 ATGCAATTAATGCATTCTCATCCTCTCCTATTAAGGAAGATGAGGCTTGAAACGCTGAAGCTGGCTCTTACCCTCAATAATATTTCTGTTACTCTTTCTGCCATGGATCTTCACACAAATCTCAGAGATAACTCTTACACTTCACAGCCAATAATGCACCTTCAAGAAACTTACCAGCTGAGGCCTAATATGAAATTAGATGAATCTCCTTTTGGTGGGGTTCCTAATTCATCACAGGGTTTCTTGCAAGATTTTAATTATCAAGTTGATGATAATTATCATCATAATCAGTTTCATCTTAATGGTTCTTCTTCATCCAACCCAGCTTCTGCTTTTGGGATCCATACTTTGAGTTTTGAATCTTTTGATAATTTTGATGTTTATGAGTGCAAGCCTAATTTTGTTGATGAGATCAACAATAATGTACATAATCATGTTCAGGTAGTTTTGGATGATTTCCAATATGAGGCTGATGCTAATTATTGTAGCTTGAACGTGCCTCATCGGAGAAATCATCAAGTCAACGACATGAACCAAAACTATGTGGCTAATTTCAATAACTCTCAGGAAATTATAAAGCCTGTGAATTTTGTTGTACCAGATGATGAACTCTCTTGCATATCCCCTTCGGTGAATTATTACAGAAAAGTTGGCTTCAATAAGAAAAGTAATAGAAGGACGGCTAGTAGTTACAGACTTCGCAAGAAATCCAACGCTGTAAAGGGCCAATGGACCATAGAAGAAGATAGGCTATTGATTCAATTGGTGGAACAATATGGAGTGAGAAAGTGGTCACATATTGCTCAAATGTTGCCAGGAAGAATAGGCAAACAGTGCAGAGAGAGGTGGCATAATCATCTAAGGCCTGACATAAAGAAAGAGACATGGACAGAAGAAGAAGACAAGATACTGATAGAAGCACATGGAGAGATAGGAAACAAATGGGCAGAAATAGCAAAGAGATTGCCAGGAAGAACAGAGAACTCTATAAAGAACCATTGGAATGCCACAAAGAGAAGACAATACTCCAAGAGAAAATGTCGCTCAAAGAACCCAAAACCATCTCTTCTACAAGAATACATCAAAAGCTTGAACTTAGACCAAAACCCACCATTAGATTATCGCAAAAGATCATCAAACAATAATACTACCACTATCATAGGCGAATCTGAAGCATCTCAGTTAATAATGGTGCCTAATTATGCGTTTAAGGAGGCACACGAGTTTTGCTTTGATGAAGAAAAAATGGCAACAATGGTGGAGTTTGAAGAGAAGAAGAAGGAGCTGGATTTGGTGGAGATGATGTGTCAGGTCAACCAGGCTATTATTGATATGTAA 1338 0.3782 MQLMHSHPLLLRKMRLETLKLALTLNNISVTLSAMDLHTNLRDNSYTSQPIMHLQETYQLRPNMKLDESPFGGVPNSSQGFLQDFNYQVDDNYHHNQFHLNGSSSSNPASAFGIHTLSFESFDNFDVYECKPNFVDEINNNVHNHVQVVLDDFQYEADANYCSLNVPHRRNHQVNDMNQNYVANFNNSQEIIKPVNFVVPDDELSCISPSVNYYRKVGFNKKSNRRTASSYRLRKKSNAVKGQWTIEEDRLLIQLVEQYGVRKWSHIAQMLPGRIGKQCRERWHNHLRPDIKKETWTEEEDKILIEAHGEIGNKWAEIAKRLPGRTENSIKNHWNATKRRQYSKRKCRSKNPKPSLLQEYIKSLNLDQNPPLDYRKRSSNNNTTTIIGESEASQLIMVPNYAFKEAHEFCFDEEKMATMVEFEEKKKELDLVEMMCQVNQAIIDM 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0596 445 Pfam Myb-like DNA-binding domain 241 287 IPR001005 -
Mibi13g0596 445 Pfam Myb-like DNA-binding domain 293 335 IPR001005 -
Mibi13g0596 445 ProSiteProfiles Myb-like domain profile. 236 287 IPR001005 -
Mibi13g0596 445 FunFam Transcriptional activator Myb isoform A 240 293 - -
Mibi13g0596 445 Gene3D - 240 292 - -
Mibi13g0596 445 ProSiteProfiles Myb-like domain profile. 288 338 IPR001005 -
Mibi13g0596 445 Gene3D - 294 360 - -
Mibi13g0596 445 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 236 291 IPR017930 -
Mibi13g0596 445 CDD SANT 295 338 IPR001005 -
Mibi13g0596 445 SUPERFAMILY Homeodomain-like 239 334 IPR009057 -
Mibi13g0596 445 FunFam Transcription factor MYB119 294 358 - -
Mibi13g0596 445 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 292 342 IPR017930 -
Mibi13g0596 445 PANTHER MYB PROTEIN-RELATED 227 360 - -
Mibi13g0596 445 CDD SANT 244 287 IPR001005 -
Mibi13g0596 445 SMART sant 240 289 IPR001005 -
Mibi13g0596 445 SMART sant 292 340 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0596 Mibi-ChrMibi13 7767042 7768927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0596 126 381 MYB Transcription Factor Family AT4G18770 56.777 2.18e-93 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi13g0596 Myb_DNA-binding 1.4e-17 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi13g0596 13 7767042 7768927 Mibi13g0596 13 7767042 7768927 ECH