Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0575 ATGGATATGAACATAGGAGGACAAGTAGAGAAGGTGAATGGAAAAGAATTGACTTATCAGGAATTTGTGAACAGTTTCATGGAGAAGAACCTTCCTGTGGTGATTACGGGACTCATGGATGATTGGAGGGCTTGCAGAGACTGGGTCACCATTAATGGCCAACCCAACCTTCACTTTTTTTCTTCCCATTTTGGGAGTTCTAAAGTTCAGGTTGCAGATTGTGGCACTAGAGAATTCACGGATCAGAAAAGGGAGGAGATGCGAGTTTCAGATTTTATAAGATGTTGGCTAGAGGGGTCTCCGGTACAGCCTAATATTGAAGATCATAATAGTAATGATCATGGCTCCGTACTGTATTTGAAGGATTGGCACTTTGTAAAGGAGTATCCAGAATATTTAGCATACATCACTCCAGTGTTCTTTCACGATGACTGGCTCAACCTCTATCTTGACTACTACAAAATGCATACAGATCCTGATAGTTACCAACAAAATAGCGATATATGCTGCTCCGACTATCGTTTTGTTTACATGGGGGCAAAAGGGTCTTGGACTCCTCTTCATGCTGATGTTTTCAGGTCATACAGTTGGTCTGCAAATGTCTGTGGGAAGAAGAGATGGCTTTTTCTAGCTCCTCATCAGAGTCATCTTGTATTTGACAGGAATCTGAAAAGCTGTGTGTATGATATCTTTGCTGAAGTAAGCGAATCAACATTTCCTGGCTTTAAAAAGACTATTTGGTTGGAATGCACGCAAGAAGCAGGTGAAATTATTTTTGTTCCCAGCGGATGGTATCATCAAGTTCAAAATCTGGAGGATACTATATCTATAAACCACAACTGGTTCAATGCCTATAACCTTTCTTGGGTGTGGAACTTACTTTTGAGGGACTACAATGAGGCCAAGGAATACATTGAGGACATCAAGGATATATGCGATGATTTTGAGGGTCTCTGCCAGCGCAATCTTTTTGCCAATACAGGGATGAACTTTTATGACTTCTTTACTTTCATAACTTGCTTTACCCTGGCCAACTTAGCGTTGCTTTGCTATCTAAGTGGAAAATATGGGAGCCCCCCTGAAAGCCCATTGACGATCACTCAGCATTTAGTTTTCAATCTTGGATCAGTGAGGAAGGTTGCAATGGAGATGAAAACCATGCATGCTCTTGAAGGAAATCATGACTGCTTCCTGGATATTATCAAAACATCTGAAGATTTTAGGTTCTCTAAGTTGTGTCCGCATTTGATAAAAACATACGTGACAATGCATGAGCAACCTTGTTTGTCTTCTGAATTCGAGAAATCTGCAGTTGATTATCTCATGGGCCTTGATGTTTTGAAAGAAAGTTCTTCTCGGATCCATACACCTGAGGACTTAATTAAACTTATAGACAATGCTGTTTCAGAACTTGGTGACAATTACGCTCAGCAACTGTCTGCAATACATAGATTAACTTTCGCCAGACTAAAATCTTTTGCTGTGGATACTGCCAAGCTGTATCAAATTGACGATGTCTCCCACGCCAAGAACTGGGGTCTGGAATTTCACTGGGACCTCTTTGACGTTTGCCTTTCACAATAG 1584 0.4091 MDMNIGGQVEKVNGKELTYQEFVNSFMEKNLPVVITGLMDDWRACRDWVTINGQPNLHFFSSHFGSSKVQVADCGTREFTDQKREEMRVSDFIRCWLEGSPVQPNIEDHNSNDHGSVLYLKDWHFVKEYPEYLAYITPVFFHDDWLNLYLDYYKMHTDPDSYQQNSDICCSDYRFVYMGAKGSWTPLHADVFRSYSWSANVCGKKRWLFLAPHQSHLVFDRNLKSCVYDIFAEVSESTFPGFKKTIWLECTQEAGEIIFVPSGWYHQVQNLEDTISINHNWFNAYNLSWVWNLLLRDYNEAKEYIEDIKDICDDFEGLCQRNLFANTGMNFYDFFTFITCFTLANLALLCYLSGKYGSPPESPLTITQHLVFNLGSVRKVAMEMKTMHALEGNHDCFLDIIKTSEDFRFSKLCPHLIKTYVTMHEQPCLSSEFEKSAVDYLMGLDVLKESSSRIHTPEDLIKLIDNAVSELGDNYAQQLSAIHRLTFARLKSFAVDTAKLYQIDDVSHAKNWGLEFHWDLFDVCLSQ 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0575 527 Pfam Cupin-like domain 20 281 IPR041667 -
Mibi13g0575 527 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 10 330 - -
Mibi13g0575 527 Gene3D Cupin 2 283 - -
Mibi13g0575 527 SUPERFAMILY Clavaminate synthase-like 4 310 - -
Mibi13g0575 527 ProSiteProfiles JmjC domain profile. 126 298 IPR003347 -
Mibi13g0575 527 FunFam JmjC domain-containing protein 4 3 283 - -
Mibi13g0575 527 SMART cupin_9 118 298 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0575 Mibi-ChrMibi13 7530223 7534697 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0575 7 290 Glycosyltransferase AT1G78280 25.000 2.14e-16 80.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mibi13g0575 Cupin_8 1.6e-24 CL0029
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi13g0575 13 7530223 7534697 Mibi13g0575 13 7530223 7534697 ECH