Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0574 ATGGATGCATCAGTAAGTAATCCAAATAAGACATGTTTTGGTTCCTTACCGTTGTTCCTCCCTAGGTTCAAACCTTTTCCCCCTGTTCTGCGTGTCATTGGAGTTCGTAGCATTGTTGTAATGCCTGTAAATCCATGGACTCTCTTGTTCCTCTGCTATTCTCTTTCACTTCTTCATCATTCGTTTATAGCTTTTGCAGTGAACTCACAAGGAGAAGCTCTTGTTTCATGGAAGAGAACCCTCAAAGGATCCCTGGAGGTGTTGAGCAGTTGGAATCCAAACGACAACACACCATGTGGCTGGTATGGAGTTAACTGTAACTCTAACAACCAGGTTGTGAAATTAGATCTGAGGTATGTGGATTTGGTTGGGACACTTCCTTCTAACTTCACCTCATTGCTTTCCCTCAACGAGCTAGTCCTAACGGGAACGAACCTCACTGGTTCAATTCCCAAAGAAATAGGCACTCTTAGCGAGCTTCACCACTTGGATTTCAGTGAAAATGCCTTGACAGGTGAAATCCCAAGTGAACTTTTCTTCTTGCCAAAGCTTGAGCAACTCCATCTGAACTCAAACCAGCTGGTGGGTTCGATTCCGAATGCAATTGGGAACCTTACGGAGTTGACGTCGCTGGTTTTATATGACAATCAATTAGGTGGTGAAATTCCCAAAAGCATTGGTAACTTGAGGAACCTGCAGGTGATCAGAGCTGGAGGAAACAAGAACCTTCAAGGCTTCTTGCCAAACGAAATTGGAAACTGTTCCAATTTGGTCGTGTTGGGTTTGGCTGAAACTAGTATCTCAGGTTCTCTTCCTCCAACTCTTGGCCTTCTTAAGAAGCTCAACACTCTTGCAATTTACACTTCACTTCTCTCTGGCCAAATTCCCCCCGAACTCGGGGATTGCAATGAGCTTCAGAACATTTATCTCTACGAGAATTCACTCTCAGGATCCATACCAAGTAGACTGGGAAATCTTAGAAACCTCAAAAATCTTCTACTATGGCAAAACAATCTAGTTGGCTCCATCCCACCAGAGCTTGGAAATTGCTACCAGTTATCCGTCATTGACATTTCGATGAACTCACTTGTTGGAAGCATTCCCAAAAGTTTTGGAAATTTGACATTGCTAGAGGAGCTTCAACTCAGTGTCAATCAGATTTCGGGTCAGATTCCAACAGAATTGGGAAATTGTCAGTTACTCACTCAGATTGAGCTGGATAACAATCTAATCACGGGCACAATACCTTCTGAATTTGGGAACCTTGGGAATCTAACTTTGTTGTTCTTGTGGCATAACAAGCTTGAAGGAACTATACCATCATCACTTTCGAGTTGTCAAAATCTGGAAGCGGTGGACCTGTCACAGAATGGATTGACAGGTTCCATTCCCAAGGGTGTATTCCAGCTCAAGAATCTGAACAAGCTTTTACTACTCTCTAACAATTTCTCCGGAAGCATACCCCCTGAGATTGGGAACTGTACATCTCTGATTCGTTTCCGAGCCAGCAACAACAGACTCACAGGGAACATCCCACCAAATATTGGAAATCTGAAGAACTTGAATTTCTTAGATCTTGCAATCAATCGCATTTCAGGAGTCATTCCAGAAGAACTCTCAGGCAGTCATAATCTCGCATTTCTCGACCTCCATTCCAATTTAATATCAGGAAGCTCGCCGGAAAATCTCAGCCAGCTAGTCTCACTCGAATTCATCGATGTCTCCGATAACATGATTGAAGGTAAACTAAGCCCAAGCCTCGGAAATCTTCGCGCACTCACAAAACTCATTCTCAGAAAAAATCACATATCAGGTTCAATTCCAAGCGAATTTGGCTCTTGTGTGAAATTACAATTATTAGATCTCAGTAGCAATAAACTCTCAGGCGAAATCCCAGGCAGTCTCGGTAACATTCCGTCGCTCGAAATCGCAATGAACCTAAGCTGTAACCAACTCAACGGCGAAATTCCTAGCGAATTTTCATCATTAACCAAACTCGGAGTTCTTGACATATCTCATAACGAGATCACCGGTACACTTCAATATCTCGAAAACCTCCAAAATCTCGTCGTCCTCAACATCTCATACAACAATCTCTCAGGTCACATACCTGACAAGCCATTCTTCTCGAAGCTTCCTCTCACCGTTCTCGAAGGAAATCCATCACTCTGCTTCTCCGGCCACCGATGCGCCGGCGACATCTCTAAAAAGTCTCTCCGGCGAACAATGGCGGCGCGTGTAGCCATGGTAGTACTTCTCTGCACCGCGTGCTTGCTTTTCCTCACGGCACTGTACATCGTCGCCGCCGCAAAACGACAGTGGTCACCGGAAAACGAAGCAGATCTCAACGGTAGTGATAACGACTTGGAGATGGGCCTACCATGGGAAGTTACACTTTACCAGAAGCTAGATCTGTCAATCTATGACGTCACAAGATGCTTGACAGCTGGCAACGTGATCGGCAAAGGACGATCCGGCGTCGTTTACAGAGTAGATCTGCCGTCAGGGTTAACGATCGCCGTGAAAAGGTACAGGCCGTCGGAGAAATTCTCTACGGCGGCGTTCTCGTCGGAGATTGCCACGCTGTCAAGAATCCGGCACCGGAATATTGTACGGCTGTTAGGTTGGGCGGCGAATCGGAAAACAAAATTACTGTTGTATGATTATTTACCGAATGGTAATTTGGATTCGGTTTTGCACTGTGGAGGGTTATTGATTGAGTGGGAGATTAGGTTGAAGATAGCGTTGGGTGTGGCCGAAGGATTAGCTTATTTACATTATGATTGTGTGCCAGCGATATTGCATAGGGATGTGAAGGCGCAGAATATATTGTTGGGAGATAGGTATGAGGCATGTTTGGCAGATTTTGGATTTGCGAGGTTGGTTGATGATGATCATCATGGTTCGTTTTCTGTAAATCCACAGTTTGCTGGTTCTTATGGCTACATTGCGCCTGAATATGGGTGCATGGTGAGAATAAGAGAGAAGAGCGACGTGTACAGCTTCGGAGTAGTACTGTTGGAGATAGTAACGGGAAAAAGACCCATAATAGATGCATCAATTATGGAGGAGGAAGGAGGAGGGCATGTGATAGGGTGGGTGAGGCAGAAGCTGAAGAGCAAGAAGGACCCAGTGGAGATAGTGGATTGCAAGCTGCAGGGACTTCCAGACACAAAGATACAAGAGATGCTTCAGGCACTTGGAATTGCATTGCTATGTACGAGTGAACGTCCAGATGATAGGCCCACCATGAAGGATGTTGCAGCATTATTGAGAGAGATTGGACATGATCCTTCTCTTTCTGATCATCATCAGCCCCACAAGGCATTACCCCCCACCTCCTCCTCCTCTCCTGTCGTTCATGCCCTTTCTTCCCCGAAAACCACTCCTCATCCTTCGTCGTTTTCTTCCTCATCTACCTTGTCCCTCCTTCTTCAGTCCTCTTCTTTTCATTCCCTTCCCCCTTACCCACCACCACCCTCACATTAA 3489 0.4534 MDASVSNPNKTCFGSLPLFLPRFKPFPPVLRVIGVRSIVVMPVNPWTLLFLCYSLSLLHHSFIAFAVNSQGEALVSWKRTLKGSLEVLSSWNPNDNTPCGWYGVNCNSNNQVVKLDLRYVDLVGTLPSNFTSLLSLNELVLTGTNLTGSIPKEIGTLSELHHLDFSENALTGEIPSELFFLPKLEQLHLNSNQLVGSIPNAIGNLTELTSLVLYDNQLGGEIPKSIGNLRNLQVIRAGGNKNLQGFLPNEIGNCSNLVVLGLAETSISGSLPPTLGLLKKLNTLAIYTSLLSGQIPPELGDCNELQNIYLYENSLSGSIPSRLGNLRNLKNLLLWQNNLVGSIPPELGNCYQLSVIDISMNSLVGSIPKSFGNLTLLEELQLSVNQISGQIPTELGNCQLLTQIELDNNLITGTIPSEFGNLGNLTLLFLWHNKLEGTIPSSLSSCQNLEAVDLSQNGLTGSIPKGVFQLKNLNKLLLLSNNFSGSIPPEIGNCTSLIRFRASNNRLTGNIPPNIGNLKNLNFLDLAINRISGVIPEELSGSHNLAFLDLHSNLISGSSPENLSQLVSLEFIDVSDNMIEGKLSPSLGNLRALTKLILRKNHISGSIPSEFGSCVKLQLLDLSSNKLSGEIPGSLGNIPSLEIAMNLSCNQLNGEIPSEFSSLTKLGVLDISHNEITGTLQYLENLQNLVVLNISYNNLSGHIPDKPFFSKLPLTVLEGNPSLCFSGHRCAGDISKKSLRRTMAARVAMVVLLCTACLLFLTALYIVAAAKRQWSPENEADLNGSDNDLEMGLPWEVTLYQKLDLSIYDVTRCLTAGNVIGKGRSGVVYRVDLPSGLTIAVKRYRPSEKFSTAAFSSEIATLSRIRHRNIVRLLGWAANRKTKLLLYDYLPNGNLDSVLHCGGLLIEWEIRLKIALGVAEGLAYLHYDCVPAILHRDVKAQNILLGDRYEACLADFGFARLVDDDHHGSFSVNPQFAGSYGYIAPEYGCMVRIREKSDVYSFGVVLLEIVTGKRPIIDASIMEEEGGGHVIGWVRQKLKSKKDPVEIVDCKLQGLPDTKIQEMLQALGIALLCTSERPDDRPTMKDVAALLREIGHDPSLSDHHQPHKALPPTSSSSPVVHALSSPKTTPHPSSFSSSSTLSLLLQSSSFHSLPPYPPPPSH 1162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0574 1162 FunFam LRR receptor-like serine/threonine-protein kinase 564 639 - -
Mibi13g0574 1162 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 577 1090 - -
Mibi13g0574 1162 MobiDBLite consensus disorder prediction 1108 1138 - -
Mibi13g0574 1162 Gene3D Ribonuclease Inhibitor 644 730 IPR032675 -
Mibi13g0574 1162 Pfam Leucine rich repeat 592 642 IPR001611 GO:0005515
Mibi13g0574 1162 Pfam Leucine rich repeat 327 387 IPR001611 GO:0005515
Mibi13g0574 1162 Pfam Leucine rich repeat 520 579 IPR001611 GO:0005515
Mibi13g0574 1162 Pfam Leucine rich repeat 401 459 IPR001611 GO:0005515
Mibi13g0574 1162 MobiDBLite consensus disorder prediction 1097 1138 - -
Mibi13g0574 1162 SMART LRR_sd22_2 422 451 - -
Mibi13g0574 1162 SMART LRR_sd22_2 518 541 - -
Mibi13g0574 1162 SMART LRR_sd22_2 205 231 - -
Mibi13g0574 1162 SMART LRR_sd22_2 542 565 - -
Mibi13g0574 1162 SMART LRR_sd22_2 663 688 - -
Mibi13g0574 1162 SMART LRR_sd22_2 566 592 - -
Mibi13g0574 1162 SMART LRR_sd22_2 614 640 - -
Mibi13g0574 1162 ProSiteProfiles Protein kinase domain profile. 814 1100 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0574 1162 Gene3D Phosphorylase Kinase; domain 1 796 889 - -
Mibi13g0574 1162 SUPERFAMILY L domain-like 616 725 - -
Mibi13g0574 1162 Gene3D Ribonuclease Inhibitor 322 402 IPR032675 -
Mibi13g0574 1162 ProSitePatterns Protein kinases ATP-binding region signature. 820 842 IPR017441 GO:0005524
Mibi13g0574 1162 SUPERFAMILY RNI-like 307 642 - -
Mibi13g0574 1162 Pfam Leucine rich repeat N-terminal domain 68 107 IPR013210 -
Mibi13g0574 1162 Gene3D Ribonuclease Inhibitor 66 216 IPR032675 -
Mibi13g0574 1162 SUPERFAMILY Protein kinase-like (PK-like) 799 1091 IPR011009 -
Mibi13g0574 1162 SMART serkin_6 814 1100 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0574 1162 SUPERFAMILY L domain-like 67 340 - -
Mibi13g0574 1162 FunFam Putative LRR receptor-like serine/threonine-protein kinase 644 729 - -
Mibi13g0574 1162 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 465 559 - -
Mibi13g0574 1162 SMART LRR_typ_2 518 541 IPR003591 -
Mibi13g0574 1162 SMART LRR_typ_2 686 710 IPR003591 -
Mibi13g0574 1162 SMART LRR_typ_2 470 494 IPR003591 -
Mibi13g0574 1162 SMART LRR_typ_2 422 446 IPR003591 -
Mibi13g0574 1162 SMART LRR_typ_2 374 398 IPR003591 -
Mibi13g0574 1162 SMART LRR_typ_2 157 181 IPR003591 -
Mibi13g0574 1162 SMART LRR_typ_2 205 229 IPR003591 -
Mibi13g0574 1162 SMART LRR_typ_2 590 614 IPR003591 -
Mibi13g0574 1162 SMART LRR_typ_2 326 350 IPR003591 -
Mibi13g0574 1162 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 890 1108 - -
Mibi13g0574 1162 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 67 240 - -
Mibi13g0574 1162 Gene3D Ribonuclease Inhibitor 403 643 IPR032675 -
Mibi13g0574 1162 Pfam Protein kinase domain 817 1087 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0574 1162 ProSitePatterns Serine/Threonine protein kinases active-site signature. 933 945 IPR008271 GO:0004672|GO:0006468
Mibi13g0574 1162 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 241 464 - -
Mibi13g0574 1162 FunFam Putative LRR receptor-like serine/threonine-protein kinase 799 889 - -
Mibi13g0574 1162 Gene3D Ribonuclease Inhibitor 217 321 IPR032675 -
Mibi13g0574 1162 Gene3D Transferase(Phosphotransferase) domain 1 890 1109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0574 Mibi-ChrMibi13 7520076 7525770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0574 65 1127 Receptor kinase-like Gene Family AT5G56040 53.860 0.0 1081
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mibi13g0574 Pkinase 1.6e-38 CL0016