Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0568 ATGGCATCATCAAGCTCTTACTCATCACCATGCGCAGCCTGCAAATTCCTGAGGAGGAAGTGCATGCCAGGGTGCATTTTCGCGCCATATTTCCCACCAGAGGAGCCTCAGAAGTTCGCACACGTGCACAAAATATTCGGAGCTAGCAATGTTACAAAGCTCCTCAACGAGCTCCTCCCTCACCAGAGAGAAGACGCCGTCAACTCCTTAGCCTATGAGGCAGAGGCACGTGTGAGAGACCCCGTCTATGGCTGTGTTGGAGCCATCTCCTTCCTCCAAAGACAAGTCCAACGTCTCCAGAAAGAACTTGAGGCCGCCAACGCCGATCTTCTCCGCTTCGCCTGCACCGACATCCAGCCGGTGGGGCCTAATTCTCTCCCCATGGTCCCACCTGGACTGGGGATCACTCCTTCTTCTCTTCAAGTTCATCATCAGCAGATGACTCATCAGAGGCCACCAAGATCAGCAGCCACCATGGAGTATATTCATAATGGAAGTGGTAATGGGGGATTGTATAGGCAATTCCCTGGGGCTTTTAATAATAACAATAATTACTCTCTTCCTTATACTATTCCATGGGCTGATACTACTACTGCTTCTGATGGAATTGATGATGGTGCCGCTGGTGGTGGTGGAGGTAATTTGTGA 648 0.5062 MASSSSYSSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFAHVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELEAANADLLRFACTDIQPVGPNSLPMVPPGLGITPSSLQVHHQQMTHQRPPRSAATMEYIHNGSGNGGLYRQFPGAFNNNNNYSLPYTIPWADTTTASDGIDDGAAGGGGGNL 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0568 215 Pfam Lateral organ boundaries (LOB) domain 10 107 IPR004883 -
Mibi13g0568 215 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 150 - -
Mibi13g0568 215 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Mibi13g0568 215 Coils Coil 89 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0568 Mibi-ChrMibi13 7453006 7453653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0568 1 116 AS2 family AT5G63090 88.889 6.54e-72 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mibi13g0568 LOB 8.5e-42 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g0293 09 3575867 3576388 Mibi13g0568 13 7453006 7453653 CCT
Mibi09g0293 09 3575867 3576388 Mibi13g0568 13 7453006 7453653 ECH
Mibi13g0568 13 7453006 7453653 Mibi13g0568 13 7453006 7453653 ECH