Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0563 ATGCTGATATCTGTGTGGATGGAGGAAGAAGAAGAGGCGAAAATGACGACGAGATTCAAGAAGAACAGGAAGAAGAGAGGACACGTAAGCGCCGGCCATGGCCGTATCGGAAAGCACAGAAAGCATCCCGGAGGTCGAGGTAACGCCGGAGGTATGCACCATCACCGAATCCTCTTCGACAAGTACCATCCTGGTTACTTCGGTAAGGTTGGTATGCGTTACTTTCACAAGCTTCGCAATCAATTTCATTGCCCCATTGTCAACATCGACAAGCTCTGGTCTTTGATTCCTCAAGATGTGAAGGATAAAGCTTCTAAGGATAAAGCCCCTGTGATCGATGTCACTCAACATGGCTATTTCAAGGTTTTGGGTAAAGGTGTTTTGCCTGAGAATCAGCCTGTGGTTGTGAAGGCTAAGCTTGTTTCCAAGATCGCTGAGAAGAAGATCAAGGAGGCTGGTGGTGCTGTTGTCCTTACTGCCTAA 483 0.4762 MLISVWMEEEEEAKMTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNQFHCPIVNIDKLWSLIPQDVKDKASKDKAPVIDVTQHGYFKVLGKGVLPENQPVVVKAKLVSKIAEKKIKEAGGAVVLTA 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0563 160 ProSitePatterns Ribosomal protein L15 signature. 121 153 IPR001196 GO:0003735|GO:0005840|GO:0006412
Mibi13g0563 160 PANTHER 60S RIBOSOMAL PROTEIN L27A 15 160 - -
Mibi13g0563 160 Hamap 50S ribosomal protein L15 [rplO]. 15 159 IPR030878 GO:0003735|GO:0006412|GO:0015934
Mibi13g0563 160 MobiDBLite consensus disorder prediction 20 48 - -
Mibi13g0563 160 FunFam 60S ribosomal protein L27a 72 160 - -
Mibi13g0563 160 Pfam Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 42 157 IPR021131 -
Mibi13g0563 160 Gene3D - 72 160 - -
Mibi13g0563 160 SUPERFAMILY Ribosomal proteins L15p and L18e 20 159 IPR036227 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0563 Mibi-ChrMibi13 7377113 7378883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0563 15 160 Cytoplasmic Ribosomal Protein Gene Family AT1G70600 88.356 1.91e-95 271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g0300 09 3680466 3680906 Mibi13g0563 13 7377113 7378883 CCT
Mibi09g0300 09 3680466 3680906 Mibi13g0563 13 7377113 7378883 ECH
Mibi13g0563 13 7377113 7378883 Mibi13g0563 13 7377113 7378883 ECH