Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0562 ATGGAGCACAAAACCAAAAATCAAGAACGAAGCTCCATCAAGTTCCTTTGTAGCTATGGCGGCAAGATTCTCCCCCGGCATACAGATGGCAAGCTCCGATACGTCGGCGGCCACACCAGAGTCCTCGCCGTCGATCCTTCAATCTCCTTTTCAGAGTTGATGTCGAAGCTTGAAGAATTTTCTGGTACGTCCGTTACGTTGAGATGTCCGTTACCGAACGGAGATTTGGAGACGTTGATTTCGGTTACCAACGATGAAGATCTGGCGCAAATAATTGAGGAGTATGATCGAGCTTCGTCGTCGTTGCCTCATCCGTTGAAGATTAGGGCAATTCTTTCGCCGCCGAAATCACACAAGAAATTATCATCTCCTTCTTCTCCGTCGTCTTCTGCTTCTAGCGCGAATCAATCTCCGTCCAGATCTCTCCATAATTCCTTCGATTCCTTGCCTTATTCGGTCGCCTATCGCTTTGTCTGTCACAACTGCTCGCCGCCGATTGGATATCCTATCGGTGTCCGTACAGGCAGTCCAAAGTTTTCGTACGGTGTTCCCTACTGCAGCAATTACTTCTTCAATTTTGCAGGTCCACTTCGACTCTGGTTGCTTGGAGATGGAAGGCAACTAGTCCTCCATGTTGTGATCAACTAA 648 0.4815 MEHKTKNQERSSIKFLCSYGGKILPRHTDGKLRYVGGHTRVLAVDPSISFSELMSKLEEFSGTSVTLRCPLPNGDLETLISVTNDEDLAQIIEEYDRASSSLPHPLKIRAILSPPKSHKKLSSPSSPSSSASSANQSPSRSLHNSFDSLPYSVAYRFVCHNCSPPIGYPIGVRTGSPKFSYGVPYCSNYFFNFAGPLRLWLLGDGRQLVLHVVIN 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0562 215 CDD PB1_UP2 16 112 - -
Mibi13g0562 215 Pfam PB1 domain 29 100 IPR000270 GO:0005515
Mibi13g0562 215 PANTHER OS05G0427100 PROTEIN-RELATED 5 141 - -
Mibi13g0562 215 SMART PB1_new 27 113 IPR000270 GO:0005515
Mibi13g0562 215 MobiDBLite consensus disorder prediction 118 141 - -
Mibi13g0562 215 MobiDBLite consensus disorder prediction 115 141 - -
Mibi13g0562 215 SUPERFAMILY CAD & PB1 domains 29 123 - -
Mibi13g0562 215 Gene3D - 31 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0562 Mibi-ChrMibi13 7372736 7373991 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0562 7 100 MAP Kinase Kinase Kinase AT5G57610 48.936 1.89e-25 101
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g0305 09 3727827 3728499 Mibi13g0562 13 7372736 7373991 CCT
Mibi13g0562 13 7372736 7373991 Mibi13g0562 13 7372736 7373991 ECH