Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0558 ATGTATATGGTATCCCCCTCAGCTAGCATTATGCATAGGTATGTTATGTATACGTTGTTTTCTTCAAAGGTAAATTATGTTATGTACAAGTTATTTATTACGCCTTCGCCTTCGTCTGTCTTAGCTTGCGACTTCGCGTTGTACATTCTTGCCTTGTGTTCTAATCCGCGAAACAAATCACTGGCAGCAAACCCAATAATGAGTTCTTCCATGGAGGTTACTCTGCAAAATCCCTCAGCCGATGAAATATCCGATCAAAACGGTGTCGTCGCCCAAGAATCAGCTCCTTCTCCCATGCTTTCTGAAGAGAAGGTCATCGTCTCTGGTACCTTGAAATCTTCCTCACCTTCTCTCTCTCAACTCGAAGTATGTTTGAAACCTTCAAGTGCAGCTCGGATCGTAGATGTCCGGTCAGCCGTCGAAAGGATGCTTGAGAACAGGTGTTTGAGCTATATTGATGGACCCATTCTTCTGCCTCTTGATGACATGTTTCTTTCAGAAAACGTGGAAAGAATATGTATCTGTGATACTGATGAGTCGACGAGCAATCATAACATTCTTTTGTTCTGGCAAGTCAAGCCTGATGTGCATGTCTTCCAGCTTAGTGAAGAAGGACCATGCGAGGAAATAAGTACCGATGGCCAACCTTCCAGCTTCAATGAATGGATTCTTCCAGCAAAAGAATTCGATGGCATGTGGGAAAGCTTAATATATGAATCTGGTCTCAAGCAAAGATTGTTAAAATATGCAGCGAGTGCTTTGCTTTTTACTGAAAAGGGCGTTGATCCATTTCTGGTTTCATGGAACCGTATTGTTCTCTTGCATGGACCTCCTGGGACTGGAAAGACATCTTTATGTAAAGCATTAGCACAAAAACTATCCATTCGATTCAATCAAAGATACCCTCAGTGTCAGCTGATTGAAGTAAATGCACATTCTTTGTTCAGCAAATGGTTCTCTGAAAGTGGCAAGCTGGTTGCAAAGCTTTTTCAAAAGATTCAAGAAATGGTAGAGGAAGAAAACAATCTGGTATTTGTTTTGATTGATGAAGTTGAAAGCCTTGCTGCTGCCAGAAAAGCCGCTTTATCTGGTTCTGAACCATCAGACTCTATTCGGGTTGTCAATGCATTGTTAACTCAGATGGACAAGTTAAAATCTTCTCCAAATGTGATAATTCTAACTACGTCCAACATAACTACTGCGATTGATATCGCTTTTGTTGATCGAGCTGATATCAAAGCATATGTTGGCCCTCCAACTCTCCAAGCTCGCTATGAAATACTAAAGTCGTGCTTGGAGGAATTGATGCGCACAGGGATCTTGACAAGTTTACAGGAGTGTATGAACATCAAGCTTCCAAACTATGCTAATGCTAAGGAAAAGTTGAACACACCTGAGAATCATGAAGCCGCTCAACTGTGCAAACAATTACTTGAAACTGCAGAGGCATGTGAGGGAATGAGCGGAAGATCTTTGAGAAAACTTCCATTCTTGGCACATGCTGCCCTTGCCAATCCGTCAGATTGCAACCCATTTAAGTTCTTATGTACAATGATAGAAACAGCCAAGAGGGAGCGCTCTGAGCTTCCCGACTGA 1596 0.4204 MYMVSPSASIMHRYVMYTLFSSKVNYVMYKLFITPSPSSVLACDFALYILALCSNPRNKSLAANPIMSSSMEVTLQNPSADEISDQNGVVAQESAPSPMLSEEKVIVSGTLKSSSPSLSQLEVCLKPSSAARIVDVRSAVERMLENRCLSYIDGPILLPLDDMFLSENVERICICDTDESTSNHNILLFWQVKPDVHVFQLSEEGPCEEISTDGQPSSFNEWILPAKEFDGMWESLIYESGLKQRLLKYAASALLFTEKGVDPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFNQRYPQCQLIEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITTAIDIAFVDRADIKAYVGPPTLQARYEILKSCLEELMRTGILTSLQECMNIKLPNYANAKEKLNTPENHEAAQLCKQLLETAEACEGMSGRSLRKLPFLAHAALANPSDCNPFKFLCTMIETAKRERSELPD 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0558 531 FunFam pachytene checkpoint protein 2 homolog 212 434 - -
Mibi13g0558 531 PANTHER PACHYTENE CHECKPOINT PROTEIN 2 101 528 IPR044539 -
Mibi13g0558 531 Gene3D - 215 436 IPR027417 -
Mibi13g0558 531 Pfam ATPase family associated with various cellular activities (AAA) 272 417 IPR003959 GO:0005524|GO:0016887
Mibi13g0558 531 CDD AAA 270 418 - -
Mibi13g0558 531 ProSitePatterns AAA-protein family signature. 390 409 IPR003960 GO:0005524|GO:0016887
Mibi13g0558 531 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 232 500 IPR027417 -
Mibi13g0558 531 PRINTS ATP-dependent Clp protease ATP-binding subunit signature 386 400 IPR001270 GO:0005524
Mibi13g0558 531 PRINTS ATP-dependent Clp protease ATP-binding subunit signature 272 290 IPR001270 GO:0005524
Mibi13g0558 531 SMART AAA_5 268 420 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0558 Mibi-ChrMibi13 7347339 7354807 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0558 272 438 Calmodulin-binding Proteins AT3G56690 29.586 2.62e-13 70.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi13g0558 13 7347339 7354807 Mibi13g0558 13 7347339 7354807 ECH