Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0555 ATGCAAGTTCAAGGAAAAAAGGATTACAATCCGAAGGCTTGTGATAAGCATTGTGAGGCCCTCTTTTATTCTGCCGCAGATAACAAAATCCTCATTTCTTCATCTTCTTCTTCCCCTATCCCCATTCCTCTCAACAATCCTCCCATGGCGATTTCTTCTTCTACTGCTTCTGCTTCCTCCAAGCTCATATTCCTCCACCCCTCTCCCTCTCCCTCCTCCTCCTCCTCCTCCTCTCTCTCTCTAAACCCCCACAAACTCACTTCCCTCACTTCCCACCTTTCGTCTTCCTTCATTAACCCATCAACAATTCTCCACCTTTCTCCCTCCTCCGCCTCCTCCGCCACCACCCGCCACCGTTCCTTCACTGTCAAAGCCGCTCGCGGCAAGTTCGAGAGAAAAAAACCCCATGTCAACATCGGCACTATTGGCCATGTTGACCATGGAAAAACCACTCTCACTGCTGCTCTCACCATGGCACTTGCTGCTTTAGGAAACAGTGCCCCCAAAAAATATGATGAAATTGATGCTGCCCCAGAAGAACGTGCTCGTGGAATCACTATTAATACTGCCACTGTTGAGTATGAGACTGAGAATCGTCATTATGCTCATGTTGATTGCCCTGGTCATGCTGATTATGTTAAGAATATGATTACTGGTGCTGCTCAGATGGATGGTGCTATTCTTGTTGTTTCTGGTGCTGATGGTCCAATGCCTCAGACTAAGGAGCATATACTCTTGGCTAAGCAAGTGGGTGTTCCTAATATGGTTGTGTTTTTGAACAAGCAGGATCAGGTTGATGATGAGGAGCTTTTGCAGCTTGTGGAATTGGAGGTTCGTGAGCTTCTTTCTTCTTATGAGTTCCCTGGTGATGATGTCCCTATTATTTCTGGTTCTGCTTTGTTGGCCTTGGAGGCATTGATGGCTAATCCTGCTATTAAACGAGGAGAAAACCAATGGGTTGACAAAATTTATGAACTTATGGATTCTGTGGATAGCTATATACCAATTCCTCAGCGTCAGACTGAGCTTCCTTTCTTGTGTGCCATTGAAGATGTGTTTTCAATCACAGGTCGTGGGACTGTGGCCACAGGGCGTGTTGAGAGAGGTACAATTAAGGTTGGAGATACCGTGGATATTGTTGGTGTGAGGGAGACAAGAAGCACAACTGTGACTGGGGTTGAAATGTTCCAGAAGATTCTTGATGAGGCCATGGCTGGGGATAATGTGGGGTTGTTGTTGAGAGGTATCCAGAAGATTGATATCCAGAGAGGCATGGTTTTGGCTAAGCCTGGCACTATTACTCCACACACCAAGTTTGAAGCAATTGTGTATGTGCTGAAGAAGGAAGAAGGAGGGAGGCACTCACCATTCTTTGCTGGTTATAGACCACAGTTCTACATGAGAACCACTGATGTGACTGGGAAAGTGACTGCCATAATGAATGATAAGGATGAAGAATCCAAGATGGTTATGCCTGGAGATCGTGTGAAGATGGTGGTTGAACTTATTGTGCCAGTGGCCTGTGAACAAGGAATGAGGTTTGCTATTAGAGAAGGAGGCAAGACTGTTGGAGCTGGTGTTATTCAATCGATCATTGAGTGA 1602 0.4594 MQVQGKKDYNPKACDKHCEALFYSAADNKILISSSSSSPIPIPLNNPPMAISSSTASASSKLIFLHPSPSPSSSSSSSLSLNPHKLTSLTSHLSSSFINPSTILHLSPSSASSATTRHRSFTVKAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALAALGNSAPKKYDEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLVELEVRELLSSYEFPGDDVPIISGSALLALEALMANPAIKRGENQWVDKIYELMDSVDSYIPIPQRQTELPFLCAIEDVFSITGRGTVATGRVERGTIKVGDTVDIVGVRETRSTTVTGVEMFQKILDEAMAGDNVGLLLRGIQKIDIQRGMVLAKPGTITPHTKFEAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTAIMNDKDEESKMVMPGDRVKMVVELIVPVACEQGMRFAIREGGKTVGAGVIQSIIE 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0555 533 Pfam Elongation factor Tu GTP binding domain 134 335 IPR000795 GO:0003924|GO:0005525
Mibi13g0555 533 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 175 190 IPR031157 -
Mibi13g0555 533 Gene3D Translation factors 472 532 - -
Mibi13g0555 533 SUPERFAMILY Translation proteins 339 435 IPR009000 -
Mibi13g0555 533 PANTHER ELONGATION FACTOR TU-RELATED 116 532 - -
Mibi13g0555 533 Pfam Elongation factor Tu domain 2 359 427 IPR004161 GO:0005525
Mibi13g0555 533 Hamap Elongation factor Tu [tuf]. 125 533 IPR004541 GO:0003746|GO:0005525|GO:0006414
Mibi13g0555 533 Pfam Elongation factor Tu C-terminal domain 432 531 IPR004160 -
Mibi13g0555 533 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 134 338 IPR000795 GO:0003924|GO:0005525
Mibi13g0555 533 TIGRFAM small_GTP: small GTP-binding protein domain 137 269 IPR005225 GO:0005525
Mibi13g0555 533 Gene3D - 126 337 IPR027417 -
Mibi13g0555 533 PRINTS GTP-binding elongation factor signature 138 151 IPR000795 GO:0003924|GO:0005525
Mibi13g0555 533 PRINTS GTP-binding elongation factor signature 255 264 IPR000795 GO:0003924|GO:0005525
Mibi13g0555 533 PRINTS GTP-binding elongation factor signature 218 229 IPR000795 GO:0003924|GO:0005525
Mibi13g0555 533 PRINTS GTP-binding elongation factor signature 202 212 IPR000795 GO:0003924|GO:0005525
Mibi13g0555 533 PRINTS GTP-binding elongation factor signature 182 190 IPR000795 GO:0003924|GO:0005525
Mibi13g0555 533 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 432 532 IPR009001 -
Mibi13g0555 533 CDD EF_Tu 135 337 IPR041709 -
Mibi13g0555 533 Gene3D Translation factors 340 468 - -
Mibi13g0555 533 FunFam Elongation factor Tu 340 468 - -
Mibi13g0555 533 TIGRFAM EF-Tu: translation elongation factor Tu 126 533 IPR004541 GO:0003746|GO:0005525|GO:0006414
Mibi13g0555 533 FunFam Elongation factor Tu 125 337 - -
Mibi13g0555 533 CDD EFTU_II 345 431 IPR033720 -
Mibi13g0555 533 CDD EFTU_III 434 528 - -
Mibi13g0555 533 FunFam Elongation factor Tu 472 532 - -
Mibi13g0555 533 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 132 360 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0555 Mibi-ChrMibi13 7327789 7330389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0555 132 531 Eukaryotic Initiation Factors Gene Family AT5G60390 28.636 1.53e-43 159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi13g0555 13 7327789 7330389 Mibi13g0555 13 7327789 7330389 ECH