Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0554 ATGAGCCTGGAAAACGACAAGAAAGAAGGGTGTTTCGTATCGGCAGAAAAAGAAGCAAATCCAACTCACAGACTTACACACTGATTTTATTCCAACAATGCTCCAGGATACAGGAAGAAACACAAGCGTGTTGAATTGAAAGCTTTGAAGAAATGGTCTAGGCAGATTTTGGAGGGGCTTTTCTATCTTCACAGCCATGATCCACCAATTATTCATCGAGATGTTAAGTGTGACAACATCTTTGTCAATGGAAATCAAGGTGAGGTGAAAATTGGTGACTTGGGACTGGCAGCCATTCTTCAGCAAGCCAATTCAGCTCATAGTGTCATAGGTACTCCAGAGTTTATGGCCCCAGAGCTCTATGAAGAAGAATACAATGAGCTTGTTGACATTTACGCTTTTGGCATGTGCTTGCTAGAATTGGTAACTTTTGAGTACCCATATGTCGAATGTGCAAATGCTGCTCAAATATACAAGAAAGTAACATCTGGAGTAATGCCAGCATCTTTGGCAAAAGTGACAGATCTTGAGGTGAAAGCATTTATAGCAAAGTGTATTGCCAATGTATCTGAACGATTATCTGCTAAGGATCTCTTGATGGATTCCTTTCTTCATATAGACGAAGATGCTGAGGATATAGGTCGTTTTTTAAGGCCTAAAATTCACCATCCAGGTAGGGAATTTAGGGTGGAAGGTCAACGGAAAGATGCCAATACAATATTTCTGAAACTGACATTAGTAGACTTATCAGGTCATATTTGCAATATCCACTTTCCTTTTAATATTGAGGTAGATACTGCAATTGGGGTTGCTGGAGAAATGGTTGAGGAGCTTGAGCTATCTAATCAAGATGTCACAAATATTGCTGAGATGATTGAGTCAGAACTTCAAAACTACTTCCCATTTTGGAATTACGGTGAAAGTCCCATCCATTCTACCACTTTTACTGGCAGTCTTTCATCAGGTCGTAAGTTCTGGTCTGATTCACCCAAGGCAATAGTCAGAAATTCTTTTTTAAGGCCCGGTGCTTCAAGTAACTTGACTGGAAATGATGCTGCCTCAGTTCATCAGGAGGCTAAGAAATGTGCTCATGATGGTGATTGGAGTTTAGGAAAGAAATCTTGTGGGATTGCTGATTTTCATCCCATTGAGAGTAGGATTCCATCTAAGGATTCAAAAGTAACTGCAGGAGAATCTCCTCAGGAAGCAGAATCTAGCATATTAGGAGATTCTGAATCAGAAAATGTCAACTTAATTGCCACAAAACTAAAAAATTTGTTGGTGACACAACGAGAGGAGTTGAAGAAATTAAAGAAGAAACATGAATTAGCCGTCTCAGATTTTCTGAAGAAGCTTCCTTATGAAGTGCGGCAGCTGGTTTTAAATGTACATAGCCTTGATTTACCTAACATCATCACTGATGCAAACAAATTTGAGGCCTCTTCCTTTGCTTAA 1455 0.3959 MSLENDKKEGCFVSAEKEANPTHRLTHXFYSNNAPGYRKKHKRVELKALKKWSRQILEGLFYLHSHDPPIIHRDVKCDNIFVNGNQGEVKIGDLGLAAILQQANSAHSVIGTPEFMAPELYEEEYNELVDIYAFGMCLLELVTFEYPYVECANAAQIYKKVTSGVMPASLAKVTDLEVKAFIAKCIANVSERLSAKDLLMDSFLHIDEDAEDIGRFLRPKIHHPGREFRVEGQRKDANTIFLKLTLVDLSGHICNIHFPFNIEVDTAIGVAGEMVEELELSNQDVTNIAEMIESELQNYFPFWNYGESPIHSTTFTGSLSSGRKFWSDSPKAIVRNSFLRPGASSNLTGNDAASVHQEAKKCAHDGDWSLGKKSCGIADFHPIESRIPSKDSKVTAGESPQEAESSILGDSESENVNLIATKLKNLLVTQREELKKLKKKHELAVSDFLKKLPYEVRQLVLNVHSLDLPNIITDANKFEASSFA 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0554 484 FunFam probable serine/threonine-protein kinase WNK9 29 209 - -
Mibi13g0554 484 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 26 384 - -
Mibi13g0554 484 Coils Coil 420 440 - -
Mibi13g0554 484 SMART serkin_6 3 204 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0554 484 ProSiteProfiles Protein kinase domain profile. 1 204 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0554 484 MobiDBLite consensus disorder prediction 392 408 - -
Mibi13g0554 484 MobiDBLite consensus disorder prediction 388 408 - -
Mibi13g0554 484 Coils Coil 275 295 - -
Mibi13g0554 484 ProSitePatterns Serine/Threonine protein kinases active-site signature. 70 82 IPR008271 GO:0004672|GO:0006468
Mibi13g0554 484 Pfam Protein kinase domain 40 204 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0554 484 Gene3D Transferase(Phosphotransferase) domain 1 35 209 - -
Mibi13g0554 484 SUPERFAMILY Protein kinase-like (PK-like) 28 204 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0554 Mibi-ChrMibi13 7324106 7327598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0554 25 456 MAP Kinase Kinase Kinase AT3G48260 50.769 1.06e-139 406
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Mibi13g0554 Pkinase 1.8e-32 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi13g0554 13 7324106 7327598 Mibi13g0554 13 7324106 7327598 ECH