Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0534 ATGTGCTTGCCTTGTTGCTTGCCTGGGCAAAGGAAGAAGCCTCAGCTTCGTTTCCATCTCCCTCTCTTCATGGCTCTCCCTCCTGCAAATTCTCACTTGTTCTTACTCTTTTCATTATTCTCCCTTCTCTTCATCGCCCATGCCAAAATCAACATCGATCCTTCAGATCTCAAAGCTTTCTTGACTTTCCACAAGGACTTGGGTTTCAACGGTCAACGCCAACCGTTGACCACTAACCCATGCGATGCCGACGGCGTCTTCTGCGAGAGAAGGCTCGCCGGAAATGAAAGCTATTCTCTCAGAATCACCAGAATCATCTTCAAGTCTAAAAATCTTAATGGGGTTTTGTCCCCTTCCATTGGGCGTCTCCCTGAGCTCAGAGAACTTTCTCTTTCAGACAACCAATTGGAGAGTCAAATTCCAACTCAGATTGTTGACTGCCGCAAACTGGAGATTCTTGACATCGGAAACAACCGATTCTCCGGTGAGGTCCCATCTGAATTGTCATCTCTCATTCGCCTCAGAGTACTTGATATATCTAACAACAGATTCTCTGGGAATTTGAATTTCTTGAAGTATTTCCCGAATTTGGAAAGTCTCTCTGTGAGTGATAATCTCTTCACTGGGAGAATTCCAGTGTCAATACGTTCATTTCGCAATCTTCAAAGCTTTAACTTTTCTGGGAATCACTTCCTTGAAATTCCTGGGCCATTGATGAAGAGATTTGGAAACTCAGAATCTGATATCCCCAAAAGATACATCCTTACAGAGAATTCAGCTCCAACAAGCAGTCACGAAGTTTCTGCTCATTCTCCAAGACCAGGCACGAACCATTCTAATAATTCATCAGTTCAAGATCCTCCAGCTCAAGCCCCAACAGCACAACATCACCACAAGTCAAAAAAGAAGAAACTTGGTGGGTGGATTCTTGGATTCATAGCAGGAGCATTCGCTGGGAGCATATCTGGGTTCATATTTTCCTTGATGTTCAAGTTAGCTGTGGCTGTGATCAAAGGAGGAGGGAAGGGTTCTGGACCTGCAATTTATAGTCCATTGATTATAAAGGCAGAGGATTTAGCTTTTCTGGAGAAAGAAGATGGGTTGAATTCATTAGAAATCATCGGTAAAGGTGGTTGCGGGGAGGTTTACCGGGCTGAATTACCGGGAACCAACAAAGTTGTTGCTATAAAGAAGGTTGTTCAACCTTCAAAAGATGCAGCTGAACTATCTGAAGAAGATAGCAAACTTCTGCACAAGAAAATGCGTCAAATTCGATCCGAGATCAACACGGTTGGCCAAATTCGACATAGAAACCTTCTTCCTCTGTTAGCTCATGTATCCAGGCCAGATTGCCACTATCTTGTGTATGAATACATGAAGAATGGGAGCTTACAAGATGTGTTGACTCAAGTCAACGCAGGTGCAAGAGAGTTGGATTGGTTGGCACGTCACAAGATTGCAGTTGGTGTAGCATCCGGCCTTGAGTACCTTCACATGCACCATAGTCCTAGAATAATTCACAGAGATCTCAAGCCTGGAAATATTCTTGTTGATGATGATATGGAAGCTAGAATTGCAGATTTTGGGCTAGCAAAAGCAATGCCAGAAGCTCATACACATGTCTCAACTTCAAATGTGGCTGGAACTGTGGGTTACATAGCACCAGAATATCATCAGACAGTGAAATTCACGGACAAGTGTGATATATATAGTTTTGGGGTCGTTCTAGGAATCTTGGTGATGGGGAAAATTCCATCTGATGCCTTCTTCCAGGATACAGAGGAGCTGAGTTTGGTGAAGTGGATGAGGAATGTAATGACGTCAGATAATCCTACGAGGGTCATTGATGAAAAGCTCAGAGGAAACGGATATGAAGAACAGATGCTTTTGGTTATGAAGATTGCATGCTTTTGCACTCTTGATGATCCCAAGGAGAGGCCTAACAGTAAGGATGTCAGATGCATGTTGTCCCAAATCAAACACTGA 1986 0.4345 MCLPCCLPGQRKKPQLRFHLPLFMALPPANSHLFLLFSLFSLLFIAHAKINIDPSDLKAFLTFHKDLGFNGQRQPLTTNPCDADGVFCERRLAGNESYSLRITRIIFKSKNLNGVLSPSIGRLPELRELSLSDNQLESQIPTQIVDCRKLEILDIGNNRFSGEVPSELSSLIRLRVLDISNNRFSGNLNFLKYFPNLESLSVSDNLFTGRIPVSIRSFRNLQSFNFSGNHFLEIPGPLMKRFGNSESDIPKRYILTENSAPTSSHEVSAHSPRPGTNHSNNSSVQDPPAQAPTAQHHHKSKKKKLGGWILGFIAGAFAGSISGFIFSLMFKLAVAVIKGGGKGSGPAIYSPLIIKAEDLAFLEKEDGLNSLEIIGKGGCGEVYRAELPGTNKVVAIKKVVQPSKDAAELSEEDSKLLHKKMRQIRSEINTVGQIRHRNLLPLLAHVSRPDCHYLVYEYMKNGSLQDVLTQVNAGARELDWLARHKIAVGVASGLEYLHMHHSPRIIHRDLKPGNILVDDDMEARIADFGLAKAMPEAHTHVSTSNVAGTVGYIAPEYHQTVKFTDKCDIYSFGVVLGILVMGKIPSDAFFQDTEELSLVKWMRNVMTSDNPTRVIDEKLRGNGYEEQMLLVMKIACFCTLDDPKERPNSKDVRCMLSQIKH 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0534 661 Gene3D Transferase(Phosphotransferase) domain 1 463 661 - -
Mibi13g0534 661 ProSiteProfiles Protein kinase domain profile. 368 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0534 661 SUPERFAMILY L domain-like 82 237 - -
Mibi13g0534 661 Pfam Protein kinase domain 370 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0534 661 Gene3D Phosphorylase Kinase; domain 1 367 462 - -
Mibi13g0534 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 505 517 IPR008271 GO:0004672|GO:0006468
Mibi13g0534 661 MobiDBLite consensus disorder prediction 260 290 - -
Mibi13g0534 661 MobiDBLite consensus disorder prediction 260 298 - -
Mibi13g0534 661 CDD STKc_IRAK 374 659 - -
Mibi13g0534 661 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 99 660 - -
Mibi13g0534 661 FunFam Leucine-rich repeat receptor-like protein kinase 459 661 - -
Mibi13g0534 661 Pfam Leucine rich repeat 124 184 IPR001611 GO:0005515
Mibi13g0534 661 SUPERFAMILY Protein kinase-like (PK-like) 363 656 IPR011009 -
Mibi13g0534 661 Gene3D Ribonuclease Inhibitor 54 251 IPR032675 -
Mibi13g0534 661 SMART serkin_6 368 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0534 Mibi-ChrMibi13 7199262 7201905 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0534 24 661 Receptor kinase-like Gene Family AT2G31880 60.796 0.0 798
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Mibi13g0534 Pkinase 1.1e-44 CL0016